Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
COL1A2P08123 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.46■■□□□ 1.19
COL1A2P08123 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.46■■□□□ 1.19
COL1A2P08123 AC023632.3-201ENST00000521633 145 ntBASIC22.46■■□□□ 1.19
COL1A2P08123 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.46■■□□□ 1.19
COL1A2P08123 C1QBPP2-201ENST00000528754 825 ntBASIC22.46■■□□□ 1.19
COL1A2P08123 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.46■■□□□ 1.19
COL1A2P08123 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.46■■□□□ 1.19
COL1A2P08123 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.46■■□□□ 1.19
COL1A2P08123 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL1A2P08123 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL1A2P08123 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.45■■□□□ 1.18
COL1A2P08123 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.45■■□□□ 1.18
COL1A2P08123 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COL1A2P08123 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL1A2P08123 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.44■■□□□ 1.18
COL1A2P08123 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.44■■□□□ 1.18
COL1A2P08123 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.44■■□□□ 1.18
COL1A2P08123 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.44■■□□□ 1.18
COL1A2P08123 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.44■■□□□ 1.18
COL1A2P08123 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 AC006557.6-201ENST00000623071 864 ntBASIC22.44■■□□□ 1.18
COL1A2P08123 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.44■■□□□ 1.18
COL1A2P08123 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
COL1A2P08123 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.44■■□□□ 1.18
COL1A2P08123 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A2P08123 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.43■■□□□ 1.18
COL1A2P08123 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL1A2P08123 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.43■■□□□ 1.18
COL1A2P08123 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.43■■□□□ 1.18
COL1A2P08123 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.43■■□□□ 1.18
COL1A2P08123 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.43■■□□□ 1.18
COL1A2P08123 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.43■■□□□ 1.18
COL1A2P08123 FAM197Y4-202ENST00000622692 608 ntBASIC22.43■■□□□ 1.18
COL1A2P08123 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A2P08123 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
COL1A2P08123 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.42■■□□□ 1.18
COL1A2P08123 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A2P08123 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A2P08123 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A2P08123 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.42■■□□□ 1.18
COL1A2P08123 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.42■■□□□ 1.18
COL1A2P08123 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A2P08123 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL1A2P08123 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A2P08123 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.41■■□□□ 1.18
COL1A2P08123 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
COL1A2P08123 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.41■■□□□ 1.18
COL1A2P08123 MTDHP1-201ENST00000605323 784 ntBASIC22.41■■□□□ 1.18
COL1A2P08123 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A2P08123 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL1A2P08123 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.41■■□□□ 1.18
COL1A2P08123 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
COL1A2P08123 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A2P08123 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms