Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM56-RWDD3S4R434 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM56-RWDD3S4R434 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 AL158211.5-201ENST00000623583 2518 ntBASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 MIR2861-201ENST00000636310 90 ntBASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM56-RWDD3S4R434 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 AC098818.2-201ENST00000564925 2320 ntBASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TMEM56-RWDD3S4R434 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM56-RWDD3S4R434 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.64■□□□□ 0.26
TMEM56-RWDD3S4R434 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 POU5F1P4-201ENST00000413175 1085 ntBASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM56-RWDD3S4R434 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 AC131281.2-201ENST00000520478 145 ntBASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 AC008175.2-201ENST00000612840 297 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms