Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	SPC1	YJR010C-A	285 nt		-0.09	□□□□□ -2.42
DDR2	P89113	YGR250C	YGR250C	2346 nt		-0.1	□□□□□ -2.43
DDR2	P89113	YER091C-A	YER091C-A	222 nt		-0.1	□□□□□ -2.43
DDR2	P89113	CMC2	YBL059C-A	330 nt		-0.1	□□□□□ -2.43
DDR2	P89113	YOR053W	YOR053W	342 nt		-0.1	□□□□□ -2.43
DDR2	P89113	PET123	YOR158W	957 nt		-0.1	□□□□□ -2.43
DDR2	P89113	SFG1	YOR315W	1041 nt		-0.1	□□□□□ -2.43
DDR2	P89113	STB6	YKL072W	2301 nt		-0.1	□□□□□ -2.43
DDR2	P89113	PKH2	YOL100W	3246 nt		-0.11	□□□□□ -2.43
DDR2	P89113	YEL075C	YEL075C	369 nt		-0.11	□□□□□ -2.43
DDR2	P89113	YER189W	YER189W	369 nt		-0.11	□□□□□ -2.43
DDR2	P89113	HOP2	YGL033W	657 nt		-0.11	□□□□□ -2.43
DDR2	P89113	SLF1	YDR515W	1344 nt		-0.12	□□□□□ -2.43
DDR2	P89113	AIM9	YER080W	1884 nt		-0.12	□□□□□ -2.43
DDR2	P89113	NCL1	YBL024W	2055 nt		-0.12	□□□□□ -2.43
DDR2	P89113	CRM1	YGR218W	3255 nt		-0.12	□□□□□ -2.43
DDR2	P89113	UBC9	YDL064W	474 nt		-0.12	□□□□□ -2.43
DDR2	P89113	CKA1	YIL035C	1119 nt		-0.12	□□□□□ -2.43
DDR2	P89113	SHU2	YDR078C	672 nt		-0.13	□□□□□ -2.43
DDR2	P89113	FMN1	YDR236C	657 nt		-0.13	□□□□□ -2.43
DDR2	P89113	ECM12	YHR021W-A	456 nt		-0.13	□□□□□ -2.43
DDR2	P89113	PHS1	YJL097W	654 nt		-0.13	□□□□□ -2.43
DDR2	P89113	REX3	YLR107W	1215 nt		-0.13	□□□□□ -2.43
DDR2	P89113	GIM3	YNL153C	390 nt		-0.13	□□□□□ -2.43
DDR2	P89113	MON1	YGL124C	1935 nt		-0.13	□□□□□ -2.43
DDR2	P89113	PRP5	YBR237W	2550 nt		-0.13	□□□□□ -2.43
DDR2	P89113	YEL009C-A	YEL009C-A	408 nt		-0.14	□□□□□ -2.43
DDR2	P89113	QCR9	YGR183C	201 nt		-0.14	□□□□□ -2.43
DDR2	P89113	MRPL50	YNR022C	420 nt		-0.14	□□□□□ -2.43
DDR2	P89113	YOL050C	YOL050C	321 nt		-0.14	□□□□□ -2.43
DDR2	P89113	APD1	YBR151W	951 nt		-0.14	□□□□□ -2.43
DDR2	P89113	snR45	snR45	172 nt		-0.14	□□□□□ -2.43
DDR2	P89113	ESP1	YGR098C	4893 nt		-0.14	□□□□□ -2.43
DDR2	P89113	CDC5	YMR001C	2118 nt		-0.14	□□□□□ -2.43
DDR2	P89113	YDR340W	YDR340W	303 nt		-0.15	□□□□□ -2.43
DDR2	P89113	YHL009W-A	YHL009W-A	1242 nt		-0.15	□□□□□ -2.43
DDR2	P89113	COX12	YLR038C	252 nt		-0.15	□□□□□ -2.43
DDR2	P89113	LSM7	YNL147W	348 nt		-0.15	□□□□□ -2.43
DDR2	P89113	snR11	snR11	258 nt		-0.15	□□□□□ -2.43
DDR2	P89113	LOA1	YPR139C	903 nt		-0.15	□□□□□ -2.43
DDR2	P89113	YIL141W	YIL141W	390 nt		-0.16	□□□□□ -2.44
DDR2	P89113	YLR232W	YLR232W	348 nt		-0.16	□□□□□ -2.44
DDR2	P89113	YLR290C	YLR290C	834 nt		-0.16	□□□□□ -2.44
DDR2	P89113	FYV6	YNL133C	522 nt		-0.16	□□□□□ -2.44
DDR2	P89113	YOL013W-A	YOL013W-A	192 nt		-0.16	□□□□□ -2.44
DDR2	P89113	CDC27	YBL084C	2277 nt		-0.16	□□□□□ -2.44
DDR2	P89113	ALY2	YJL084C	3141 nt		-0.16	□□□□□ -2.44
DDR2	P89113	KDX1	YKL161C	1302 nt		-0.16	□□□□□ -2.44
DDR2	P89113	VMA7	YGR020C	357 nt		-0.17	□□□□□ -2.44
DDR2	P89113	DSE2	YHR143W	978 nt		-0.17	□□□□□ -2.44
DDR2	P89113	ABM1	YJR108W	372 nt		-0.17	□□□□□ -2.44
DDR2	P89113	RRT7	YLL030C	342 nt		-0.17	□□□□□ -2.44
DDR2	P89113	YMR178W	YMR178W	825 nt		-0.17	□□□□□ -2.44
DDR2	P89113	YOR032W-A	YOR032W-A	201 nt		-0.17	□□□□□ -2.44
DDR2	P89113	snR190	snR190	190 nt		-0.17	□□□□□ -2.44
DDR2	P89113	YCR015C	YCR015C	954 nt		-0.18	□□□□□ -2.44
DDR2	P89113	YKL177W	YKL177W	339 nt		-0.18	□□□□□ -2.44
DDR2	P89113	SEC8	YPR055W	3198 nt		-0.19	□□□□□ -2.44
DDR2	P89113	HLR1	YDR528W	1272 nt		-0.19	□□□□□ -2.44
DDR2	P89113	SNX4	YJL036W	1272 nt		-0.19	□□□□□ -2.44
DDR2	P89113	SFM1	YOR021C	642 nt		-0.19	□□□□□ -2.44
DDR2	P89113	IES4	YOR189W	351 nt		-0.19	□□□□□ -2.44
DDR2	P89113	MRP2	YPR166C	348 nt		-0.19	□□□□□ -2.44
DDR2	P89113	WHI3	YNL197C	1986 nt		-0.19	□□□□□ -2.44
DDR2	P89113	YCR108C	YCR108C	192 nt		-0.2	□□□□□ -2.44
DDR2	P89113	SLU7	YDR088C	1149 nt		-0.2	□□□□□ -2.44
DDR2	P89113	DUO1	YGL061C	744 nt		-0.2	□□□□□ -2.44
DDR2	P89113	YGR011W	YGR011W	327 nt		-0.2	□□□□□ -2.44
DDR2	P89113	YCL046W	YCL046W	324 nt		-0.2	□□□□□ -2.44
DDR2	P89113	VIK1	YPL253C	1944 nt		-0.21	□□□□□ -2.44
DDR2	P89113	YOR192C-B	YOR192C-B	5313 nt		-0.21	□□□□□ -2.44
DDR2	P89113	RTR1	YER139C	681 nt		-0.21	□□□□□ -2.44
DDR2	P89113	YLR225C	YLR225C	1224 nt		-0.21	□□□□□ -2.44
DDR2	P89113	UAF30	YOR295W	687 nt		-0.21	□□□□□ -2.44
DDR2	P89113	YPR145C-A	YPR145C-A	237 nt		-0.21	□□□□□ -2.44
DDR2	P89113	TFB1	YDR311W	1929 nt		-0.21	□□□□□ -2.44
DDR2	P89113	YLL054C	YLL054C	2532 nt		-0.21	□□□□□ -2.44
DDR2	P89113	SPT21	YMR179W	2277 nt		-0.21	□□□□□ -2.44
DDR2	P89113	NUR1	YDL089W	1455 nt		-0.22	□□□□□ -2.44
DDR2	P89113	MUD2	YKL074C	1584 nt		-0.22	□□□□□ -2.44
DDR2	P89113	SWF1	YDR126W	1011 nt		-0.22	□□□□□ -2.44
DDR2	P89113	YIR020C	YIR020C	303 nt		-0.22	□□□□□ -2.44
DDR2	P89113	SWS2	YNL081C	432 nt		-0.22	□□□□□ -2.44
DDR2	P89113	YPL034W	YPL034W	498 nt		-0.22	□□□□□ -2.44
DDR2	P89113	YCL001W-A	YCL001W-A	462 nt		-0.22	□□□□□ -2.44
DDR2	P89113	YOR192C-A	YOR192C-A	1317 nt		-0.22	□□□□□ -2.44
DDR2	P89113	ZRG8	YER033C	3231 nt		-0.22	□□□□□ -2.44
DDR2	P89113	GDS1	YOR355W	1569 nt		-0.23	□□□□□ -2.45
DDR2	P89113	YIR036W-A	YIR036W-A	402 nt		-0.23	□□□□□ -2.45
DDR2	P89113	YMR321C	YMR321C	318 nt		-0.23	□□□□□ -2.45
DDR2	P89113	YBL073W	YBL073W	312 nt		-0.23	□□□□□ -2.45
DDR2	P89113	YPL135C-A	YPL135C-A	174 nt		-0.23	□□□□□ -2.45
DDR2	P89113	THO2	YNL139C	4794 nt		-0.24	□□□□□ -2.45
DDR2	P89113	YDR042C	YDR042C	603 nt		-0.24	□□□□□ -2.45
DDR2	P89113	ULI1	YFR026C	510 nt		-0.24	□□□□□ -2.45
DDR2	P89113	YMR099C	YMR099C	894 nt		-0.24	□□□□□ -2.45
DDR2	P89113	YOR108C-A	YOR108C-A	210 nt		-0.24	□□□□□ -2.45
DDR2	P89113	HAL1	YPR005C	885 nt		-0.24	□□□□□ -2.45
DDR2	P89113	SNF12	YNR023W	1701 nt		-0.24	□□□□□ -2.45
DDR2	P89113	BMT5	YIL096C	1011 nt		-0.25	□□□□□ -2.45

Retrieved 100 of 7,029 protein–RNA pairs in 59 ms