Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 PRP6YBR055C 2700 nt3.33□□□□□ -1.88
VAC8P39968 SDC25YLL016W 3147 nt3.32□□□□□ -1.88
VAC8P39968 MTR4YJL050W 3222 nt3.32□□□□□ -1.88
VAC8P39968 YDL152WYDL152W 366 nt3.32□□□□□ -1.88
VAC8P39968 RPL25YOL127W 429 nt3.32□□□□□ -1.88
VAC8P39968 VPS64YDR200C 1815 nt3.32□□□□□ -1.88
VAC8P39968 REC8YPR007C 2043 nt3.31□□□□□ -1.88
VAC8P39968 SHH3YMR118C 591 nt3.31□□□□□ -1.88
VAC8P39968 YAF9YNL107W 681 nt3.31□□□□□ -1.88
VAC8P39968 STU2YLR045C 2667 nt3.31□□□□□ -1.88
VAC8P39968 NAN1YPL126W 2691 nt3.31□□□□□ -1.88
VAC8P39968 PTC5YOR090C 1719 nt3.3□□□□□ -1.88
VAC8P39968 SWT1YOR166C 1377 nt3.3□□□□□ -1.88
VAC8P39968 YDR102CYDR102C 333 nt3.3□□□□□ -1.88
VAC8P39968 NFT1YKR103W 3657 nt3.3□□□□□ -1.88
VAC8P39968 VPS41YDR080W 2979 nt3.3□□□□□ -1.88
VAC8P39968 FAP7YDL166C 594 nt3.29□□□□□ -1.88
VAC8P39968 YGL014C-AYGL014C-A 162 nt3.29□□□□□ -1.88
VAC8P39968 YLR031WYLR031W 561 nt3.29□□□□□ -1.88
VAC8P39968 TUS1YLR425W 3924 nt3.29□□□□□ -1.88
VAC8P39968 SIN3YOL004W 4611 nt3.28□□□□□ -1.88
VAC8P39968 GOT1YMR292W 417 nt3.28□□□□□ -1.88
VAC8P39968 YBL073WYBL073W 312 nt3.28□□□□□ -1.88
VAC8P39968 snR42snR42 351 nt3.28□□□□□ -1.88
VAC8P39968 STT4YLR305C 5703 nt3.28□□□□□ -1.88
VAC8P39968 NCL1YBL024W 2055 nt3.28□□□□□ -1.89
VAC8P39968 IPT1YDR072C 1584 nt3.27□□□□□ -1.89
VAC8P39968 YDR413CYDR413C 576 nt3.27□□□□□ -1.89
VAC8P39968 YER097WYER097W 330 nt3.27□□□□□ -1.89
VAC8P39968 RPL39YJL189W 156 nt3.27□□□□□ -1.89
VAC8P39968 YOR231C-AYOR231C-A 201 nt3.27□□□□□ -1.89
VAC8P39968 RLI1YDR091C 1827 nt3.27□□□□□ -1.89
VAC8P39968 POL3YDL102W 3294 nt3.26□□□□□ -1.89
VAC8P39968 MPH1YIR002C 2982 nt3.26□□□□□ -1.89
VAC8P39968 tC(GCA)BtC(GCA)B 72 nt3.26□□□□□ -1.89
VAC8P39968 tC(GCA)GtC(GCA)G 72 nt3.26□□□□□ -1.89
VAC8P39968 tC(GCA)P1tC(GCA)P1 72 nt3.26□□□□□ -1.89
VAC8P39968 tC(GCA)P2tC(GCA)P2 72 nt3.26□□□□□ -1.89
VAC8P39968 YKL083WYKL083W 615 nt3.26□□□□□ -1.89
VAC8P39968 IRC23YOR044W 474 nt3.26□□□□□ -1.89
VAC8P39968 TIM18YOR297C 579 nt3.26□□□□□ -1.89
VAC8P39968 YMR317WYMR317W 3423 nt3.26□□□□□ -1.89
VAC8P39968 UBP11YKR098C 2154 nt3.25□□□□□ -1.89
VAC8P39968 FLO9YAL063C 3969 nt3.25□□□□□ -1.89
VAC8P39968 NHP2YDL208W 471 nt3.25□□□□□ -1.89
VAC8P39968 BMH2YDR099W 822 nt3.25□□□□□ -1.89
VAC8P39968 SDC1YDR469W 528 nt3.25□□□□□ -1.89
VAC8P39968 HMF1YER057C 390 nt3.25□□□□□ -1.89
VAC8P39968 TWF1YGR080W 999 nt3.25□□□□□ -1.89
VAC8P39968 YJL202CYJL202C 348 nt3.25□□□□□ -1.89
VAC8P39968 YMR324CYMR324C 243 nt3.25□□□□□ -1.89
VAC8P39968 GCN1YGL195W 8019 nt3.25□□□□□ -1.89
VAC8P39968 PCF11YDR228C 1881 nt3.24□□□□□ -1.89
VAC8P39968 CDC20YGL116W 1833 nt3.24□□□□□ -1.89
VAC8P39968 snR65snR65 100 nt3.24□□□□□ -1.89
VAC8P39968 YDL025W-AYDL025W-A 105 nt3.24□□□□□ -1.89
VAC8P39968 FMP16YDR070C 282 nt3.24□□□□□ -1.89
VAC8P39968 YGL239CYGL239C 315 nt3.24□□□□□ -1.89
VAC8P39968 YAR070CYAR070C 300 nt3.24□□□□□ -1.89
VAC8P39968 YPR146CYPR146C 330 nt3.24□□□□□ -1.89
VAC8P39968 YJL070CYJL070C 2667 nt3.24□□□□□ -1.89
VAC8P39968 REV1YOR346W 2958 nt3.24□□□□□ -1.89
VAC8P39968 AIM9YER080W 1884 nt3.23□□□□□ -1.89
VAC8P39968 GRX8YLR364W 330 nt3.23□□□□□ -1.89
VAC8P39968 GIS4YML006C 2325 nt3.23□□□□□ -1.89
VAC8P39968 ISF1YMR081C 1017 nt3.23□□□□□ -1.89
VAC8P39968 LSM7YNL147W 348 nt3.23□□□□□ -1.89
VAC8P39968 YOR050CYOR050C 348 nt3.23□□□□□ -1.89
VAC8P39968 HRD3YLR207W 2502 nt3.23□□□□□ -1.89
VAC8P39968 INP53YOR109W 3324 nt3.22□□□□□ -1.89
VAC8P39968 KAR3YPR141C 2190 nt3.22□□□□□ -1.89
VAC8P39968 SNU114YKL173W 3027 nt3.22□□□□□ -1.89
VAC8P39968 GCD6YDR211W 2139 nt3.22□□□□□ -1.89
VAC8P39968 YDR183C-AYDR183C-A 258 nt3.21□□□□□ -1.9
VAC8P39968 tF(GAA)DtF(GAA)D 73 nt3.21□□□□□ -1.9
VAC8P39968 tF(GAA)NtF(GAA)N 73 nt3.21□□□□□ -1.9
VAC8P39968 YGL024WYGL024W 336 nt3.21□□□□□ -1.9
VAC8P39968 SHE2YKL130C 741 nt3.21□□□□□ -1.9
VAC8P39968 RPL36AYMR194W 303 nt3.21□□□□□ -1.9
VAC8P39968 PGA1YNL158W 597 nt3.21□□□□□ -1.9
VAC8P39968 UTP14YML093W 2700 nt3.21□□□□□ -1.9
VAC8P39968 CSR2YPR030W 3366 nt3.2□□□□□ -1.9
VAC8P39968 DIS3YOL021C 3006 nt3.2□□□□□ -1.9
VAC8P39968 DAD4YDR320C-A 219 nt3.2□□□□□ -1.9
VAC8P39968 WIP1YDR374W-A 270 nt3.2□□□□□ -1.9
VAC8P39968 YDR464C-AYDR464C-A 189 nt3.2□□□□□ -1.9
VAC8P39968 YKR033CYKR033C 426 nt3.2□□□□□ -1.9
VAC8P39968 APC9YLR102C 798 nt3.2□□□□□ -1.9
VAC8P39968 RPL26AYLR344W 384 nt3.2□□□□□ -1.9
VAC8P39968 YIL082W-AYIL082W-A 4497 nt3.2□□□□□ -1.9
VAC8P39968 YBP1YBR216C 2025 nt3.19□□□□□ -1.9
VAC8P39968 YER039C-AYER039C-A 219 nt3.19□□□□□ -1.9
VAC8P39968 SPT4YGR063C 309 nt3.19□□□□□ -1.9
VAC8P39968 LSO2YGR169C-A 279 nt3.19□□□□□ -1.9
VAC8P39968 YGR174W-AYGR174W-A 87 nt3.19□□□□□ -1.9
VAC8P39968 YIL066W-AYIL066W-A 444 nt3.19□□□□□ -1.9
VAC8P39968 YJL020W-AYJL020W-A 258 nt3.19□□□□□ -1.9
VAC8P39968 HSK3YKL138C-A 210 nt3.19□□□□□ -1.9
VAC8P39968 YPL229WYPL229W 621 nt3.19□□□□□ -1.9
VAC8P39968 SGD1YLR336C 2700 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms