Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AL161658.1-201ENST00000623641 1967 ntBASIC26.52■■□□□ 1.84
NCKAP1Q9Y2A7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 DUX4L11-201ENST00000611504 1267 ntBASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 DUX4L12-201ENST00000614593 1267 ntBASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 DUX4L14-201ENST00000621227 1267 ntBASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
NCKAP1Q9Y2A7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.5■■□□□ 1.83
NCKAP1Q9Y2A7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.5■■□□□ 1.83
NCKAP1Q9Y2A7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NCKAP1Q9Y2A7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.49■■□□□ 1.83
NCKAP1Q9Y2A7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NCKAP1Q9Y2A7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.49■■□□□ 1.83
NCKAP1Q9Y2A7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NCKAP1Q9Y2A7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.48■■□□□ 1.83
NCKAP1Q9Y2A7 MIR3648-2-201ENST00000581792 180 ntBASIC26.48■■□□□ 1.83
NCKAP1Q9Y2A7 MIR3648-1-201ENST00000615959 180 ntBASIC26.48■■□□□ 1.83
NCKAP1Q9Y2A7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.48■■□□□ 1.83
NCKAP1Q9Y2A7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NCKAP1Q9Y2A7 MIR639-201ENST00000384974 98 ntBASIC26.47■■□□□ 1.83
NCKAP1Q9Y2A7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.47■■□□□ 1.83
NCKAP1Q9Y2A7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NCKAP1Q9Y2A7 AC016575.1-201ENST00000607026 382 ntBASIC26.46■■□□□ 1.83
NCKAP1Q9Y2A7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NCKAP1Q9Y2A7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NCKAP1Q9Y2A7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NCKAP1Q9Y2A7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
NCKAP1Q9Y2A7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.43■■□□□ 1.82
NCKAP1Q9Y2A7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NCKAP1Q9Y2A7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NCKAP1Q9Y2A7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.42■■□□□ 1.82
NCKAP1Q9Y2A7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
NCKAP1Q9Y2A7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCKAP1Q9Y2A7 MIR4449-201ENST00000578365 66 ntBASIC26.41■■□□□ 1.82
NCKAP1Q9Y2A7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.4■■□□□ 1.82
NCKAP1Q9Y2A7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.39■■□□□ 1.82
NCKAP1Q9Y2A7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCKAP1Q9Y2A7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.37■■□□□ 1.81
NCKAP1Q9Y2A7 CR559946.2-201ENST00000623684 991 ntBASIC26.37■■□□□ 1.81
NCKAP1Q9Y2A7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCKAP1Q9Y2A7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.35■■□□□ 1.81
NCKAP1Q9Y2A7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NCKAP1Q9Y2A7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
NCKAP1Q9Y2A7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NCKAP1Q9Y2A7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.34■■□□□ 1.81
NCKAP1Q9Y2A7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NCKAP1Q9Y2A7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NCKAP1Q9Y2A7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.32■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L13-201ENST00000554103 1267 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L15-201ENST00000611059 1267 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L23-201ENST00000615195 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L24-201ENST00000617576 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L22-201ENST00000618238 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L20-201ENST00000619712 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L21-201ENST00000622058 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L10-201ENST00000622460 1267 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 DUX4L25-201ENST00000624915 1269 ntBASIC26.31■■□□□ 1.8
NCKAP1Q9Y2A7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NCKAP1Q9Y2A7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.3■■□□□ 1.8
NCKAP1Q9Y2A7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NCKAP1Q9Y2A7 AC010864.1-201ENST00000609407 1511 ntBASIC26.29■■□□□ 1.8
NCKAP1Q9Y2A7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NCKAP1Q9Y2A7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NCKAP1Q9Y2A7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NCKAP1Q9Y2A7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
NCKAP1Q9Y2A7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NCKAP1Q9Y2A7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NCKAP1Q9Y2A7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NCKAP1Q9Y2A7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NCKAP1Q9Y2A7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NCKAP1Q9Y2A7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
NCKAP1Q9Y2A7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
NCKAP1Q9Y2A7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NCKAP1Q9Y2A7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.25■■□□□ 1.79
NCKAP1Q9Y2A7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NCKAP1Q9Y2A7 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.25■■□□□ 1.79
NCKAP1Q9Y2A7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NCKAP1Q9Y2A7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.24■■□□□ 1.79
NCKAP1Q9Y2A7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.24■■□□□ 1.79
NCKAP1Q9Y2A7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NCKAP1Q9Y2A7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.23■■□□□ 1.79
NCKAP1Q9Y2A7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NCKAP1Q9Y2A7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
NCKAP1Q9Y2A7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NCKAP1Q9Y2A7 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.22■■□□□ 1.79
NCKAP1Q9Y2A7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
NCKAP1Q9Y2A7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NCKAP1Q9Y2A7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NCKAP1Q9Y2A7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NCKAP1Q9Y2A7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NCKAP1Q9Y2A7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms