Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 DUX4L15-201ENST00000611059 1267 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L23-201ENST00000615195 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L24-201ENST00000617576 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L22-201ENST00000618238 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L20-201ENST00000619712 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L21-201ENST00000622058 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L10-201ENST00000622460 1267 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L25-201ENST00000624915 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.22■□□□□ 0.83
NOTCH3Q9UM47 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOTCH3Q9UM47 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.15■□□□□ 0.82
NOTCH3Q9UM47 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.13■□□□□ 0.81
NOTCH3Q9UM47 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.13■□□□□ 0.81
NOTCH3Q9UM47 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NOTCH3Q9UM47 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NOTCH3Q9UM47 RARRES2P2-201ENST00000394842 485 ntBASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NOTCH3Q9UM47 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NOTCH3Q9UM47 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NOTCH3Q9UM47 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.02■□□□□ 0.79
NOTCH3Q9UM47 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOTCH3Q9UM47 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20■□□□□ 0.79
NOTCH3Q9UM47 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NOTCH3Q9UM47 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.98■□□□□ 0.79
NOTCH3Q9UM47 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NOTCH3Q9UM47 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NOTCH3Q9UM47 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NOTCH3Q9UM47 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 ABHD17AP5-201ENST00000580133 923 ntBASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 RNF126P1-201ENST00000567452 1320 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms