Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
SH3TC1Q8TE82 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SH3TC1Q8TE82 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SH3TC1Q8TE82 AC016575.1-201ENST00000607026 382 ntBASIC33.24■■■□□ 2.91
SH3TC1Q8TE82 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SH3TC1Q8TE82 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33.22■■■□□ 2.91
SH3TC1Q8TE82 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.21■■■□□ 2.91
SH3TC1Q8TE82 CR559946.2-201ENST00000623684 991 ntBASIC33.21■■■□□ 2.91
SH3TC1Q8TE82 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
SH3TC1Q8TE82 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SH3TC1Q8TE82 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.2■■■□□ 2.91
SH3TC1Q8TE82 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.2■■■□□ 2.91
SH3TC1Q8TE82 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SH3TC1Q8TE82 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SH3TC1Q8TE82 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.19■■■□□ 2.9
SH3TC1Q8TE82 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SH3TC1Q8TE82 AL161658.1-201ENST00000623641 1967 ntBASIC33.19■■■□□ 2.9
SH3TC1Q8TE82 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SH3TC1Q8TE82 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SH3TC1Q8TE82 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SH3TC1Q8TE82 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.17■■■□□ 2.9
SH3TC1Q8TE82 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SH3TC1Q8TE82 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.15■■■□□ 2.9
SH3TC1Q8TE82 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SH3TC1Q8TE82 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SH3TC1Q8TE82 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.14■■■□□ 2.9
SH3TC1Q8TE82 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SH3TC1Q8TE82 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC33.14■■■□□ 2.9
SH3TC1Q8TE82 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SH3TC1Q8TE82 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.13■■■□□ 2.89
SH3TC1Q8TE82 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC33.13■■■□□ 2.89
SH3TC1Q8TE82 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC33.12■■■□□ 2.89
SH3TC1Q8TE82 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.12■■■□□ 2.89
SH3TC1Q8TE82 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC33.11■■■□□ 2.89
SH3TC1Q8TE82 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SH3TC1Q8TE82 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SH3TC1Q8TE82 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SH3TC1Q8TE82 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
SH3TC1Q8TE82 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SH3TC1Q8TE82 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.07■■■□□ 2.89
SH3TC1Q8TE82 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC33.07■■■□□ 2.88
SH3TC1Q8TE82 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SH3TC1Q8TE82 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SH3TC1Q8TE82 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SH3TC1Q8TE82 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.03■■■□□ 2.88
SH3TC1Q8TE82 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
SH3TC1Q8TE82 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L13-201ENST00000554103 1267 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L15-201ENST00000611059 1267 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L23-201ENST00000615195 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L24-201ENST00000617576 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L22-201ENST00000618238 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L20-201ENST00000619712 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L21-201ENST00000622058 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L10-201ENST00000622460 1267 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 DUX4L25-201ENST00000624915 1269 ntBASIC33.01■■■□□ 2.87
SH3TC1Q8TE82 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33■■■□□ 2.87
SH3TC1Q8TE82 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33■■■□□ 2.87
SH3TC1Q8TE82 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SH3TC1Q8TE82 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33■■■□□ 2.87
SH3TC1Q8TE82 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SH3TC1Q8TE82 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SH3TC1Q8TE82 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SH3TC1Q8TE82 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SH3TC1Q8TE82 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
SH3TC1Q8TE82 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.97■■■□□ 2.87
SH3TC1Q8TE82 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SH3TC1Q8TE82 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.94■■■□□ 2.86
SH3TC1Q8TE82 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
SH3TC1Q8TE82 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
SH3TC1Q8TE82 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
SH3TC1Q8TE82 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
SH3TC1Q8TE82 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
SH3TC1Q8TE82 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
SH3TC1Q8TE82 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
SH3TC1Q8TE82 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.92■■■□□ 2.86
SH3TC1Q8TE82 AC010864.1-201ENST00000609407 1511 ntBASIC32.92■■■□□ 2.86
SH3TC1Q8TE82 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.92■■■□□ 2.86
SH3TC1Q8TE82 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SH3TC1Q8TE82 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
SH3TC1Q8TE82 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
SH3TC1Q8TE82 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.9■■■□□ 2.86
SH3TC1Q8TE82 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.89■■■□□ 2.86
SH3TC1Q8TE82 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SH3TC1Q8TE82 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SH3TC1Q8TE82 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SH3TC1Q8TE82 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
SH3TC1Q8TE82 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SH3TC1Q8TE82 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.87■■■□□ 2.85
SH3TC1Q8TE82 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SH3TC1Q8TE82 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.86■■■□□ 2.85
SH3TC1Q8TE82 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SH3TC1Q8TE82 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.85■■■□□ 2.85
SH3TC1Q8TE82 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SH3TC1Q8TE82 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms