Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NEK11Q8NG66 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NEK11Q8NG66 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
NEK11Q8NG66 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NEK11Q8NG66 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NEK11Q8NG66 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NEK11Q8NG66 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
NEK11Q8NG66 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
NEK11Q8NG66 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
NEK11Q8NG66 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.52■■■□□ 2.16
NEK11Q8NG66 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
NEK11Q8NG66 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
NEK11Q8NG66 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
NEK11Q8NG66 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NEK11Q8NG66 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NEK11Q8NG66 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NEK11Q8NG66 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.5■■■□□ 2.15
NEK11Q8NG66 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
NEK11Q8NG66 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
NEK11Q8NG66 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
NEK11Q8NG66 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.49■■■□□ 2.15
NEK11Q8NG66 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NEK11Q8NG66 AC010864.1-201ENST00000609407 1511 ntBASIC28.48■■■□□ 2.15
NEK11Q8NG66 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NEK11Q8NG66 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NEK11Q8NG66 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.48■■■□□ 2.15
NEK11Q8NG66 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.47■■■□□ 2.15
NEK11Q8NG66 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
NEK11Q8NG66 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
NEK11Q8NG66 AL139393.2-201ENST00000608721 2025 ntBASIC28.45■■■□□ 2.15
NEK11Q8NG66 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
NEK11Q8NG66 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
NEK11Q8NG66 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NEK11Q8NG66 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NEK11Q8NG66 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
NEK11Q8NG66 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
NEK11Q8NG66 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
NEK11Q8NG66 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.43■■■□□ 2.14
NEK11Q8NG66 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NEK11Q8NG66 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NEK11Q8NG66 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NEK11Q8NG66 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
NEK11Q8NG66 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NEK11Q8NG66 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NEK11Q8NG66 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
NEK11Q8NG66 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NEK11Q8NG66 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NEK11Q8NG66 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.4■■■□□ 2.14
NEK11Q8NG66 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NEK11Q8NG66 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NEK11Q8NG66 AC135731.1-201ENST00000569415 2548 ntBASIC28.39■■■□□ 2.14
NEK11Q8NG66 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
NEK11Q8NG66 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NEK11Q8NG66 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NEK11Q8NG66 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NEK11Q8NG66 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NEK11Q8NG66 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NEK11Q8NG66 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NEK11Q8NG66 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NEK11Q8NG66 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NEK11Q8NG66 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.34■■■□□ 2.13
NEK11Q8NG66 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NEK11Q8NG66 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
NEK11Q8NG66 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NEK11Q8NG66 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.33■■■□□ 2.13
NEK11Q8NG66 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK11Q8NG66 AL391121.1-201ENST00000607967 1349 ntBASIC28.33■■■□□ 2.13
NEK11Q8NG66 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.33■■■□□ 2.13
NEK11Q8NG66 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NEK11Q8NG66 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.32■■■□□ 2.12
NEK11Q8NG66 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.32■■■□□ 2.12
NEK11Q8NG66 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NEK11Q8NG66 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.32■■■□□ 2.12
NEK11Q8NG66 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NEK11Q8NG66 AC142086.6-201ENST00000621154 1765 ntBASIC28.32■■■□□ 2.12
NEK11Q8NG66 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NEK11Q8NG66 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NEK11Q8NG66 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NEK11Q8NG66 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
NEK11Q8NG66 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK11Q8NG66 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NEK11Q8NG66 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.29■■■□□ 2.12
NEK11Q8NG66 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.28■■■□□ 2.12
NEK11Q8NG66 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NEK11Q8NG66 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NEK11Q8NG66 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NEK11Q8NG66 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
NEK11Q8NG66 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.27■■■□□ 2.12
NEK11Q8NG66 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.27■■■□□ 2.12
NEK11Q8NG66 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
NEK11Q8NG66 CAHM-201ENST00000604200 896 ntBASIC28.27■■■□□ 2.12
NEK11Q8NG66 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NEK11Q8NG66 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NEK11Q8NG66 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NEK11Q8NG66 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NEK11Q8NG66 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NEK11Q8NG66 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.25■■■□□ 2.11
NEK11Q8NG66 AC136428.2-201ENST00000563187 214 ntBASIC28.25■■■□□ 2.11
NEK11Q8NG66 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NEK11Q8NG66 AC097358.2-201ENST00000607541 1159 ntBASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms