Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.12■■■□□ 2.89
DDX60Q8IY21 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
DDX60Q8IY21 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
DDX60Q8IY21 AL161658.1-201ENST00000623641 1967 ntBASIC33.1■■■□□ 2.89
DDX60Q8IY21 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC33.1■■■□□ 2.89
DDX60Q8IY21 DUX4L11-201ENST00000611504 1267 ntBASIC33.1■■■□□ 2.89
DDX60Q8IY21 DUX4L12-201ENST00000614593 1267 ntBASIC33.1■■■□□ 2.89
DDX60Q8IY21 DUX4L14-201ENST00000621227 1267 ntBASIC33.1■■■□□ 2.89
DDX60Q8IY21 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC33.09■■■□□ 2.89
DDX60Q8IY21 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
DDX60Q8IY21 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.07■■■□□ 2.89
DDX60Q8IY21 MIR639-201ENST00000384974 98 ntBASIC33.07■■■□□ 2.88
DDX60Q8IY21 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.06■■■□□ 2.88
DDX60Q8IY21 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
DDX60Q8IY21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.05■■■□□ 2.88
DDX60Q8IY21 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.05■■■□□ 2.88
DDX60Q8IY21 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
DDX60Q8IY21 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
DDX60Q8IY21 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
DDX60Q8IY21 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
DDX60Q8IY21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.03■■■□□ 2.88
DDX60Q8IY21 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.03■■■□□ 2.88
DDX60Q8IY21 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.03■■■□□ 2.88
DDX60Q8IY21 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
DDX60Q8IY21 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
DDX60Q8IY21 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
DDX60Q8IY21 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
DDX60Q8IY21 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.01■■■□□ 2.88
DDX60Q8IY21 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
DDX60Q8IY21 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.01■■■□□ 2.87
DDX60Q8IY21 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33■■■□□ 2.87
DDX60Q8IY21 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
DDX60Q8IY21 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
DDX60Q8IY21 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
DDX60Q8IY21 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
DDX60Q8IY21 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.99■■■□□ 2.87
DDX60Q8IY21 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
DDX60Q8IY21 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.98■■■□□ 2.87
DDX60Q8IY21 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.97■■■□□ 2.87
DDX60Q8IY21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
DDX60Q8IY21 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
DDX60Q8IY21 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
DDX60Q8IY21 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
DDX60Q8IY21 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.94■■■□□ 2.86
DDX60Q8IY21 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
DDX60Q8IY21 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
DDX60Q8IY21 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
DDX60Q8IY21 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
DDX60Q8IY21 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.92■■■□□ 2.86
DDX60Q8IY21 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
DDX60Q8IY21 AC010864.1-201ENST00000609407 1511 ntBASIC32.9■■■□□ 2.86
DDX60Q8IY21 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
DDX60Q8IY21 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.89■■■□□ 2.85
DDX60Q8IY21 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
DDX60Q8IY21 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.88■■■□□ 2.85
DDX60Q8IY21 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
DDX60Q8IY21 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L13-201ENST00000554103 1267 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L15-201ENST00000611059 1267 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L23-201ENST00000615195 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L24-201ENST00000617576 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L22-201ENST00000618238 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L20-201ENST00000619712 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L21-201ENST00000622058 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L10-201ENST00000622460 1267 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 DUX4L25-201ENST00000624915 1269 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 LINC00273-201ENST00000539813 1452 ntBASIC32.85■■■□□ 2.85
DDX60Q8IY21 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
DDX60Q8IY21 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
DDX60Q8IY21 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
DDX60Q8IY21 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
DDX60Q8IY21 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
DDX60Q8IY21 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.82■■■□□ 2.85
DDX60Q8IY21 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.82■■■□□ 2.84
DDX60Q8IY21 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
DDX60Q8IY21 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.81■■■□□ 2.84
DDX60Q8IY21 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
DDX60Q8IY21 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
DDX60Q8IY21 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
DDX60Q8IY21 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
DDX60Q8IY21 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.78■■■□□ 2.84
DDX60Q8IY21 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
DDX60Q8IY21 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
DDX60Q8IY21 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.77■■■□□ 2.84
DDX60Q8IY21 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.76■■■□□ 2.84
DDX60Q8IY21 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.83
DDX60Q8IY21 HSD17B1P1-201ENST00000590052 955 ntBASIC32.75■■■□□ 2.83
DDX60Q8IY21 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
DDX60Q8IY21 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.74■■■□□ 2.83
DDX60Q8IY21 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
DDX60Q8IY21 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
DDX60Q8IY21 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.74■■■□□ 2.83
DDX60Q8IY21 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.74■■■□□ 2.83
DDX60Q8IY21 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
DDX60Q8IY21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
DDX60Q8IY21 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.73■■■□□ 2.83
DDX60Q8IY21 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.71■■■□□ 2.83
DDX60Q8IY21 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
DDX60Q8IY21 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
DDX60Q8IY21 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.68■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms