Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 KBTBD2-207ENST00000485611 537 ntTSL 414.37□□□□□ -0.111e-7■■■■□ 19.6
DDX42Q86XP3 KBTBD2-204ENST00000452926 537 ntTSL 414.37□□□□□ -0.111e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-208ENST00000579366 681 ntTSL 311.75□□□□□ -0.531e-7■■■■□ 19.6
DDX42Q86XP3 KBTBD2-203ENST00000424468 593 ntTSL 48.43□□□□□ -1.061e-7■■■■□ 19.6
DDX42Q86XP3 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.09□□□□□ -1.111e-21■■■■□ 19.6
DDX42Q86XP3 KBTBD2-205ENST00000453627 724 ntTSL 35.12□□□□□ -1.591e-7■■■■□ 19.6
DDX42Q86XP3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.63■■□□□ 1.371e-9■■■■□ 19.5
DDX42Q86XP3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.571e-9■■■■□ 19.5
DDX42Q86XP3 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)29.82■■■□□ 2.362e-9■■■■□ 19.4
DDX42Q86XP3 MVD-210ENST00000565610 507 ntTSL 320.89■□□□□ 0.931e-7■■■■□ 19.3
DDX42Q86XP3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.916e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-210ENST00000435265 1879 ntTSL 220.14■□□□□ 0.816e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-207ENST00000423859 832 ntTSL 319.35■□□□□ 0.696e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-205ENST00000418705 932 ntTSL 317.55■□□□□ 0.46e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-203ENST00000411892 584 ntTSL 215.58■□□□□ 0.086e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-211ENST00000448394 688 ntTSL 215.27■□□□□ 0.046e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.24■□□□□ 0.036e-7■■■□□ 19.2
DDX42Q86XP3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.056e-7■■■□□ 19.2
DDX42Q86XP3 EMC1-213ENST00000641089 570 nt14.52□□□□□ -0.096e-7■■■□□ 19.2
DDX42Q86XP3 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.556e-7■■■□□ 19.2
DDX42Q86XP3 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.686e-7■■■□□ 19.2
DDX42Q86XP3 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC10.03□□□□□ -0.86e-7■■■□□ 19.2
DDX42Q86XP3 MVD-213ENST00000566636 863 ntTSL 320.83■□□□□ 0.936e-8■■■□□ 19.1
DDX42Q86XP3 MVD-214ENST00000567064 758 ntTSL 319.73■□□□□ 0.756e-8■■■□□ 19.1
DDX42Q86XP3 MVD-216ENST00000568709 809 ntTSL 519.61■□□□□ 0.736e-8■■■□□ 19.1
DDX42Q86XP3 MVD-208ENST00000563785 888 ntTSL 219.54■□□□□ 0.726e-8■■■□□ 19.1
DDX42Q86XP3 MVD-217ENST00000569177 870 ntTSL 517.77■□□□□ 0.446e-8■■■□□ 19.1
DDX42Q86XP3 MVD-206ENST00000563170 904 ntTSL 317.35■□□□□ 0.376e-8■■■□□ 19.1
DDX42Q86XP3 MVD-215ENST00000568133 853 ntTSL 317.35■□□□□ 0.376e-8■■■□□ 19.1
DDX42Q86XP3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.074e-7■■■□□ 19
DDX42Q86XP3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.034e-7■■■□□ 19
DDX42Q86XP3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.37■■□□□ 1.974e-7■■■□□ 19
DDX42Q86XP3 VEGFA-220ENST00000519767 970 ntTSL 1 (best)26.89■■□□□ 1.94e-7■■■□□ 19
DDX42Q86XP3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.94e-7■■■□□ 19
DDX42Q86XP3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.874e-7■■■□□ 19
DDX42Q86XP3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.694e-7■■■□□ 19
DDX42Q86XP3 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)10.03□□□□□ -0.85e-7■■■□□ 18.8
DDX42Q86XP3 MVD-209ENST00000565149 2352 ntTSL 1 (best)21.11■□□□□ 0.975e-9■■■□□ 18.5
DDX42Q86XP3 VEGFA-214ENST00000493786 551 ntTSL 27.96□□□□□ -1.148e-7■■■□□ 18.5
DDX42Q86XP3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.434e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-203ENST00000437402 563 ntTSL 523.4■■□□□ 1.344e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-214ENST00000503282 584 ntTSL 223.12■■□□□ 1.294e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)22.63■■□□□ 1.214e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.214e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-229ENST00000510129 582 ntTSL 322.58■■□□□ 1.214e-7■■■□□ 18.4
DDX42Q86XP3 C1QTNF12-203ENST00000468365 647 ntTSL 322.44■■□□□ 1.184e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-212ENST00000481126 389 ntTSL 222.09■■□□□ 1.134e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-213ENST00000482138 588 ntTSL 422.09■■□□□ 1.134e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-215ENST00000493074 627 ntTSL 422.09■■□□□ 1.134e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-204ENST00000454495 603 ntTSL 321.62■■□□□ 1.054e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-220ENST00000505307 743 ntTSL 521.24■□□□□ 0.994e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-206ENST00000461813 587 ntTSL 420.88■□□□□ 0.934e-7■■■□□ 18.4
DDX42Q86XP3 WARS-207ENST00000553524 707 ntTSL 320.88■□□□□ 0.934e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-202ENST00000427201 562 ntTSL 420.88■□□□□ 0.934e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-215ENST00000503418 662 ntTSL 420.59■□□□□ 0.894e-7■■■□□ 18.4
DDX42Q86XP3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.884e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-209ENST00000473045 542 ntTSL 419.93■□□□□ 0.784e-7■■■□□ 18.4
DDX42Q86XP3 WARS-218ENST00000554772 562 ntTSL 319.54■□□□□ 0.724e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.584e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-208ENST00000468101 574 ntTSL 418.67■□□□□ 0.584e-7■■■□□ 18.4
DDX42Q86XP3 WARS-236ENST00000556783 567 ntTSL 518.1■□□□□ 0.494e-7■■■□□ 18.4
DDX42Q86XP3 WARS-214ENST00000554331 831 ntTSL 218.1■□□□□ 0.494e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-213ENST00000502690 599 ntTSL 418.02■□□□□ 0.484e-7■■■□□ 18.4
DDX42Q86XP3 WARS-239ENST00000557239 471 ntTSL 417.87■□□□□ 0.454e-7■■■□□ 18.4
DDX42Q86XP3 WARS-206ENST00000553413 568 ntTSL 517.06■□□□□ 0.324e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-210ENST00000475827 545 ntTSL 416.69■□□□□ 0.264e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.234e-7■■■□□ 18.4
DDX42Q86XP3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.26■□□□□ 0.194e-7■■■□□ 18.4
DDX42Q86XP3 WARS-222ENST00000555063 573 ntTSL 215.68■□□□□ 0.14e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-228ENST00000508974 568 ntTSL 415.63■□□□□ 0.094e-7■■■□□ 18.4
DDX42Q86XP3 SRPRA-204ENST00000530680 558 ntTSL 415.52■□□□□ 0.084e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.044e-7■■■□□ 18.4
DDX42Q86XP3 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.094e-7■■■□□ 18.4
DDX42Q86XP3 AKNA-209ENST00000492875 3894 ntTSL 214.24□□□□□ -0.134e-7■■■□□ 18.4
DDX42Q86XP3 WARS-215ENST00000554509 563 ntTSL 414.02□□□□□ -0.174e-7■■■□□ 18.4
DDX42Q86XP3 WARS-231ENST00000556579 565 ntTSL 214.02□□□□□ -0.174e-7■■■□□ 18.4
DDX42Q86XP3 WARS-210ENST00000553769 560 ntTSL 413.27□□□□□ -0.294e-7■■■□□ 18.4
DDX42Q86XP3 WARS-217ENST00000554605 560 ntTSL 313.27□□□□□ -0.294e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.394e-7■■■□□ 18.4
DDX42Q86XP3 SRPRA-203ENST00000528744 856 ntTSL 212.18□□□□□ -0.464e-7■■■□□ 18.4
DDX42Q86XP3 WARS-208ENST00000553545 591 ntTSL 411.82□□□□□ -0.524e-7■■■□□ 18.4
DDX42Q86XP3 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.564e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-232ENST00000514755 593 ntTSL 411.54□□□□□ -0.564e-7■■■□□ 18.4
DDX42Q86XP3 WARS-241ENST00000557347 577 ntTSL 410.88□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 WARS-228ENST00000556338 547 ntTSL 410.88□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC10.88□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 WARS-233ENST00000556660 584 ntTSL 410.88□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 WARS-235ENST00000556698 640 ntTSL 410.88□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.674e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-227ENST00000508818 584 ntTSL 210.71□□□□□ -0.694e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.834e-7■■■□□ 18.4
DDX42Q86XP3 UBE2D3-223ENST00000508249 604 ntTSL 49.66□□□□□ -0.864e-7■■■□□ 18.4
DDX42Q86XP3 WARS-211ENST00000553808 1060 ntTSL 29.37□□□□□ -0.914e-7■■■□□ 18.4
Retrieved 100 of 2,477 protein–RNA pairs in 17.6 ms