RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
UBE2D3-202ENST00000338145 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
UBE2D3-202ENST00000338145 PHF23Q9BUL5 403 aaPredicted RBP27.75■■■□□ 2.03
UBE2D3-202ENST00000338145 SENP3Q9H4L4 574 aaPredicted RBP27.51■■□□□ 1.99
UBE2D3-202ENST00000338145 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
UBE2D3-202ENST00000338145 FOXD1Q16676 465 aa25.41■■□□□ 1.66
UBE2D3-202ENST00000338145 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
UBE2D3-202ENST00000338145 ADRA2BP18089 450 aa24.39■■□□□ 1.49
UBE2D3-202ENST00000338145 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
UBE2D3-202ENST00000338145 MSH5O43196 834 aa23.56■■□□□ 1.36
UBE2D3-202ENST00000338145 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
UBE2D3-202ENST00000338145 PPP4R3CPQ6ZMV5 832 aa22.63■■□□□ 1.21
UBE2D3-202ENST00000338145 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
UBE2D3-202ENST00000338145 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-202ENST00000338145 KCNA4P22459 653 aa22.09■■□□□ 1.13
UBE2D3-202ENST00000338145 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
UBE2D3-202ENST00000338145 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
UBE2D3-202ENST00000338145 DMRT2Q9Y5R5 561 aa21.95■■□□□ 1.1
UBE2D3-202ENST00000338145 NPM3O75607 178 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-202ENST00000338145 ABCC9O60706 1549 aa21.68■■□□□ 1.06
UBE2D3-202ENST00000338145 RNF216Q9NWF9 866 aaPredicted RBP21.64■■□□□ 1.05
UBE2D3-202ENST00000338145 HOXD11P31277 338 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-202ENST00000338145 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
UBE2D3-202ENST00000338145 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
UBE2D3-202ENST00000338145 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
UBE2D3-202ENST00000338145 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
UBE2D3-202ENST00000338145 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
UBE2D3-202ENST00000338145 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
UBE2D3-202ENST00000338145 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
UBE2D3-202ENST00000338145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
UBE2D3-202ENST00000338145 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
UBE2D3-202ENST00000338145 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
UBE2D3-202ENST00000338145 ZBTB22O15209 634 aa20.3■□□□□ 0.84
UBE2D3-202ENST00000338145 NACADO15069 1562 aa20.29■□□□□ 0.84
UBE2D3-202ENST00000338145 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
UBE2D3-202ENST00000338145 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-202ENST00000338145 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
UBE2D3-202ENST00000338145 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
UBE2D3-202ENST00000338145 U3KPZ7 1027 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-202ENST00000338145 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
UBE2D3-202ENST00000338145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-202ENST00000338145 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-202ENST00000338145 C1QBPQ07021 282 aaKnown RBP19.95■□□□□ 0.78
UBE2D3-202ENST00000338145 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
UBE2D3-202ENST00000338145 SAMD1Q6SPF0 538 aaPredicted RBP19.92■□□□□ 0.78
UBE2D3-202ENST00000338145 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
UBE2D3-202ENST00000338145 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
UBE2D3-202ENST00000338145 APLP2Q06481 763 aa19.84■□□□□ 0.77
UBE2D3-202ENST00000338145 ATXN8OSP0DMR3 200 aa19.81■□□□□ 0.76
UBE2D3-202ENST00000338145 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
UBE2D3-202ENST00000338145 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
UBE2D3-202ENST00000338145 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
UBE2D3-202ENST00000338145 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
UBE2D3-202ENST00000338145 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
UBE2D3-202ENST00000338145 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
UBE2D3-202ENST00000338145 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
UBE2D3-202ENST00000338145 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-202ENST00000338145 ATF5Q9Y2D1 282 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-202ENST00000338145 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
UBE2D3-202ENST00000338145 CAPN15O75808 1086 aa19.42■□□□□ 0.7
UBE2D3-202ENST00000338145 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
UBE2D3-202ENST00000338145 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
UBE2D3-202ENST00000338145 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
UBE2D3-202ENST00000338145 DSG3P32926 999 aa19.15■□□□□ 0.66
UBE2D3-202ENST00000338145 POLA2Q14181 598 aa19.04■□□□□ 0.64
UBE2D3-202ENST00000338145 ABCB7O75027 752 aa18.99■□□□□ 0.63
UBE2D3-202ENST00000338145 CUX2O14529 1486 aa18.94■□□□□ 0.62
UBE2D3-202ENST00000338145 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-202ENST00000338145 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
UBE2D3-202ENST00000338145 FBLN2P98095 1184 aa18.77■□□□□ 0.6
UBE2D3-202ENST00000338145 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
UBE2D3-202ENST00000338145 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
UBE2D3-202ENST00000338145 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
UBE2D3-202ENST00000338145 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
UBE2D3-202ENST00000338145 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
UBE2D3-202ENST00000338145 NESP48681 1621 aa18.48■□□□□ 0.55
UBE2D3-202ENST00000338145 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
UBE2D3-202ENST00000338145 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
UBE2D3-202ENST00000338145 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
UBE2D3-202ENST00000338145 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
UBE2D3-202ENST00000338145 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
UBE2D3-202ENST00000338145 SPDYE2BA6NHP3 402 aa18.36■□□□□ 0.53
UBE2D3-202ENST00000338145 SPDYE6P0CI01 402 aa18.36■□□□□ 0.53
UBE2D3-202ENST00000338145 SPDYE2Q495Y8 402 aa18.36■□□□□ 0.53
UBE2D3-202ENST00000338145 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
UBE2D3-202ENST00000338145 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
UBE2D3-202ENST00000338145 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
UBE2D3-202ENST00000338145 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
UBE2D3-202ENST00000338145 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
UBE2D3-202ENST00000338145 FKBP8Q14318 412 aa18.3■□□□□ 0.52
UBE2D3-202ENST00000338145 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
UBE2D3-202ENST00000338145 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.51
UBE2D3-202ENST00000338145 SSUH2Q9Y2M2 353 aa18.2■□□□□ 0.5
UBE2D3-202ENST00000338145 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-202ENST00000338145 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
UBE2D3-202ENST00000338145 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
UBE2D3-202ENST00000338145 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
UBE2D3-202ENST00000338145 PROM2Q8N271 834 aa18.1■□□□□ 0.49
UBE2D3-202ENST00000338145 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
UBE2D3-202ENST00000338145 WDR62O43379 1518 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms