Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PDS5AQ29RF7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PDS5AQ29RF7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PDS5AQ29RF7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PDS5AQ29RF7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PDS5AQ29RF7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
PDS5AQ29RF7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
PDS5AQ29RF7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PDS5AQ29RF7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
PDS5AQ29RF7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32■■■□□ 2.71
PDS5AQ29RF7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PDS5AQ29RF7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32■■■□□ 2.71
PDS5AQ29RF7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.99■■■□□ 2.71
PDS5AQ29RF7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PDS5AQ29RF7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
PDS5AQ29RF7 AC010864.1-201ENST00000609407 1511 ntBASIC31.96■■■□□ 2.71
PDS5AQ29RF7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PDS5AQ29RF7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.95■■■□□ 2.71
PDS5AQ29RF7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PDS5AQ29RF7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
PDS5AQ29RF7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.94■■■□□ 2.7
PDS5AQ29RF7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PDS5AQ29RF7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.94■■■□□ 2.7
PDS5AQ29RF7 LINC01971-201ENST00000617888 1048 ntBASIC31.94■■■□□ 2.7
PDS5AQ29RF7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
PDS5AQ29RF7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.93■■■□□ 2.7
PDS5AQ29RF7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.92■■■□□ 2.7
PDS5AQ29RF7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PDS5AQ29RF7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PDS5AQ29RF7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.91■■■□□ 2.7
PDS5AQ29RF7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
PDS5AQ29RF7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.9■■■□□ 2.7
PDS5AQ29RF7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDS5AQ29RF7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PDS5AQ29RF7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDS5AQ29RF7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PDS5AQ29RF7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
PDS5AQ29RF7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PDS5AQ29RF7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PDS5AQ29RF7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PDS5AQ29RF7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PDS5AQ29RF7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
PDS5AQ29RF7 HLA-V-202ENST00000446817 847 ntBASIC31.85■■■□□ 2.69
PDS5AQ29RF7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.85■■■□□ 2.69
PDS5AQ29RF7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PDS5AQ29RF7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.84■■■□□ 2.69
PDS5AQ29RF7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PDS5AQ29RF7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.82■■■□□ 2.68
PDS5AQ29RF7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.81■■■□□ 2.68
PDS5AQ29RF7 DUX4L11-201ENST00000611504 1267 ntBASIC31.81■■■□□ 2.68
PDS5AQ29RF7 DUX4L12-201ENST00000614593 1267 ntBASIC31.81■■■□□ 2.68
PDS5AQ29RF7 DUX4L14-201ENST00000621227 1267 ntBASIC31.81■■■□□ 2.68
PDS5AQ29RF7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PDS5AQ29RF7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.79■■■□□ 2.68
PDS5AQ29RF7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.78■■■□□ 2.68
PDS5AQ29RF7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PDS5AQ29RF7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
PDS5AQ29RF7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDS5AQ29RF7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.76■■■□□ 2.68
PDS5AQ29RF7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.76■■■□□ 2.68
PDS5AQ29RF7 MIR3648-2-201ENST00000581792 180 ntBASIC31.75■■■□□ 2.67
PDS5AQ29RF7 MIR3648-1-201ENST00000615959 180 ntBASIC31.75■■■□□ 2.67
PDS5AQ29RF7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDS5AQ29RF7 AL135925.1-201ENST00000605920 1701 ntBASIC31.74■■■□□ 2.67
PDS5AQ29RF7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDS5AQ29RF7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDS5AQ29RF7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.74■■■□□ 2.67
PDS5AQ29RF7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PDS5AQ29RF7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
PDS5AQ29RF7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.73■■■□□ 2.67
PDS5AQ29RF7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.73■■■□□ 2.67
PDS5AQ29RF7 CR559946.2-201ENST00000623684 991 ntBASIC31.73■■■□□ 2.67
PDS5AQ29RF7 LINC00273-201ENST00000539813 1452 ntBASIC31.72■■■□□ 2.67
PDS5AQ29RF7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
PDS5AQ29RF7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PDS5AQ29RF7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDS5AQ29RF7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDS5AQ29RF7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.72■■■□□ 2.67
PDS5AQ29RF7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PDS5AQ29RF7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
PDS5AQ29RF7 MIR639-201ENST00000384974 98 ntBASIC31.71■■■□□ 2.67
PDS5AQ29RF7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.71■■■□□ 2.67
PDS5AQ29RF7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.69■■■□□ 2.66
PDS5AQ29RF7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.69■■■□□ 2.66
PDS5AQ29RF7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDS5AQ29RF7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.67■■■□□ 2.66
PDS5AQ29RF7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PDS5AQ29RF7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L13-201ENST00000554103 1267 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 AC016575.1-201ENST00000607026 382 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L15-201ENST00000611059 1267 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L23-201ENST00000615195 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L24-201ENST00000617576 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L22-201ENST00000618238 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L20-201ENST00000619712 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L21-201ENST00000622058 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L10-201ENST00000622460 1267 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 DUX4L25-201ENST00000624915 1269 ntBASIC31.66■■■□□ 2.66
PDS5AQ29RF7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDS5AQ29RF7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms