Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YOR072WYOR072W 315 nt7.9□□□□□ -1.14
TY1A-ER1P0CX71 QDR2YIL121W 1629 nt7.89□□□□□ -1.15
TY1A-ER1P0CX71 PCP1YGR101W 1041 nt7.89□□□□□ -1.15
TY1A-ER1P0CX71 TIR3YIL011W 810 nt7.89□□□□□ -1.15
TY1A-ER1P0CX71 YIL092WYIL092W 1902 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 MEX67YPL169C 1800 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 TAF11YML015C 1041 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 TIF34YMR146C 1044 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 SPP1YPL138C 1062 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 snR34snR34 203 nt7.88□□□□□ -1.15
TY1A-ER1P0CX71 GNP1YDR508C 1992 nt7.86□□□□□ -1.15
TY1A-ER1P0CX71 YKL030WYKL030W 606 nt7.86□□□□□ -1.15
TY1A-ER1P0CX71 POM34YLR018C 900 nt7.86□□□□□ -1.15
TY1A-ER1P0CX71 YHR131CYHR131C 2553 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YER190C-AYER190C-A 576 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YGR296C-AYGR296C-A 576 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 tR(UCU)Q1tR(UCU)Q1 73 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 MDM35YKL053C-A 261 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YLR415CYLR415C 339 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YML133W-AYML133W-A 576 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YNL339W-AYNL339W-A 576 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 YPL283W-AYPL283W-A 576 nt7.85□□□□□ -1.15
TY1A-ER1P0CX71 MRPL24YMR193W 777 nt7.84□□□□□ -1.15
TY1A-ER1P0CX71 SLD7YOR060C 774 nt7.84□□□□□ -1.15
TY1A-ER1P0CX71 YKL133CYKL133C 1392 nt7.84□□□□□ -1.16
TY1A-ER1P0CX71 FMS1YMR020W 1527 nt7.83□□□□□ -1.16
TY1A-ER1P0CX71 YHR219WYHR219W 1875 nt7.83□□□□□ -1.16
TY1A-ER1P0CX71 HEM14YER014W 1620 nt7.83□□□□□ -1.16
TY1A-ER1P0CX71 UBC12YLR306W 567 nt7.83□□□□□ -1.16
TY1A-ER1P0CX71 AAC3YBR085W 924 nt7.83□□□□□ -1.16
TY1A-ER1P0CX71 TOK1YJL093C 2076 nt7.82□□□□□ -1.16
TY1A-ER1P0CX71 YLR311CYLR311C 348 nt7.81□□□□□ -1.16
TY1A-ER1P0CX71 YNR048WYNR048W 1182 nt7.81□□□□□ -1.16
TY1A-ER1P0CX71 ATG15YCR068W 1563 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 YHR140WYHR140W 720 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 DBR1YKL149C 1218 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 YMR074CYMR074C 438 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 LIP1YMR298W 453 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 GAL2YLR081W 1725 nt7.8□□□□□ -1.16
TY1A-ER1P0CX71 NBA1YOL070C 1506 nt7.79□□□□□ -1.16
TY1A-ER1P0CX71 ORM1YGR038W 669 nt7.79□□□□□ -1.16
TY1A-ER1P0CX71 PHO23YNL097C 993 nt7.79□□□□□ -1.16
TY1A-ER1P0CX71 OYE3YPL171C 1203 nt7.79□□□□□ -1.16
TY1A-ER1P0CX71 LEU9YOR108W 1815 nt7.79□□□□□ -1.16
TY1A-ER1P0CX71 MPS2YGL075C 1164 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 MAD2YJL030W 591 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 ELO1YJL196C 933 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 YOL079WYOL079W 399 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 SPP2YOR148C 558 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 AME1YBR211C 975 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 AGP3YFL055W 1677 nt7.78□□□□□ -1.16
TY1A-ER1P0CX71 YKR023WYKR023W 1593 nt7.77□□□□□ -1.17
TY1A-ER1P0CX71 ATG23YLR431C 1362 nt7.77□□□□□ -1.17
TY1A-ER1P0CX71 YJR056CYJR056C 711 nt7.77□□□□□ -1.17
TY1A-ER1P0CX71 SHB17YKR043C 816 nt7.77□□□□□ -1.17
TY1A-ER1P0CX71 DIG1YPL049C 1359 nt7.76□□□□□ -1.17
TY1A-ER1P0CX71 COX3Q0275 810 nt7.76□□□□□ -1.17
TY1A-ER1P0CX71 SBA1YKL117W 651 nt7.76□□□□□ -1.17
TY1A-ER1P0CX71 SPC24YMR117C 642 nt7.76□□□□□ -1.17
TY1A-ER1P0CX71 PET8YNL003C 855 nt7.76□□□□□ -1.17
TY1A-ER1P0CX71 ARC19YKL013C 516 nt7.75□□□□□ -1.17
TY1A-ER1P0CX71 SNU71YGR013W 1863 nt7.75□□□□□ -1.17
TY1A-ER1P0CX71 FLR1YBR008C 1647 nt7.74□□□□□ -1.17
TY1A-ER1P0CX71 CDS1YBR029C 1374 nt7.74□□□□□ -1.17
TY1A-ER1P0CX71 CWP2YKL096W-A 279 nt7.74□□□□□ -1.17
TY1A-ER1P0CX71 ISR1YPR106W 1332 nt7.74□□□□□ -1.17
TY1A-ER1P0CX71 DAK2YFL053W 1776 nt7.74□□□□□ -1.17
TY1A-ER1P0CX71 REX3YLR107W 1215 nt7.73□□□□□ -1.17
TY1A-ER1P0CX71 YLR283WYLR283W 945 nt7.73□□□□□ -1.17
TY1A-ER1P0CX71 NRT1YOR071C 1797 nt7.73□□□□□ -1.17
TY1A-ER1P0CX71 STD1YOR047C 1335 nt7.73□□□□□ -1.17
TY1A-ER1P0CX71 YBR138CYBR138C 1575 nt7.72□□□□□ -1.17
TY1A-ER1P0CX71 CDC10YCR002C 969 nt7.72□□□□□ -1.17
TY1A-ER1P0CX71 MAF1YDR005C 1188 nt7.72□□□□□ -1.17
TY1A-ER1P0CX71 SPR1YOR190W 1338 nt7.72□□□□□ -1.17
TY1A-ER1P0CX71 YPS3YLR121C 1527 nt7.72□□□□□ -1.17
TY1A-ER1P0CX71 YDL157CYDL157C 357 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 PTC7YHR076W 1032 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 SEN2YLR105C 1134 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 AVO2YMR068W 1281 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 YPL251WYPL251W 303 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 DTR1YBR180W 1719 nt7.71□□□□□ -1.18
TY1A-ER1P0CX71 ALR1YOL130W 2580 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 GND2YGR256W 1479 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 SED1YDR077W 1017 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 UFD1YGR048W 1086 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 YMR244WYMR244W 1068 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 BRR1YPR057W 1026 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 FES1YBR101C 873 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 PEX34YCL056C 435 nt7.7□□□□□ -1.18
TY1A-ER1P0CX71 VPS62YGR141W 1404 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 YRF1-2YER190W 5046 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 FIT1YDR534C 1587 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 YDL086WYDL086W 822 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 YML089CYML089C 369 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 DIT1YDR403W 1611 nt7.69□□□□□ -1.18
TY1A-ER1P0CX71 FET5YFL041W 1869 nt7.68□□□□□ -1.18
TY1A-ER1P0CX71 TOA2YKL058W 369 nt7.68□□□□□ -1.18
TY1A-ER1P0CX71 MSA2YKR077W 1092 nt7.68□□□□□ -1.18
TY1A-ER1P0CX71 SRL2YLR082C 1179 nt7.68□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 67.6 ms