Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH8O95206 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH8O95206 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
PCDH8O95206 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
PCDH8O95206 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDH8O95206 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PCDH8O95206 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDH8O95206 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH8O95206 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH8O95206 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH8O95206 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH8O95206 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
PCDH8O95206 HLA-V-202ENST00000446817 847 ntBASIC26.37■■□□□ 1.81
PCDH8O95206 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDH8O95206 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH8O95206 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH8O95206 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PCDH8O95206 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDH8O95206 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDH8O95206 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PCDH8O95206 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDH8O95206 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDH8O95206 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDH8O95206 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH8O95206 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH8O95206 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH8O95206 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDH8O95206 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH8O95206 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH8O95206 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH8O95206 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
PCDH8O95206 AC010864.1-201ENST00000609407 1511 ntBASIC26.27■■□□□ 1.8
PCDH8O95206 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH8O95206 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH8O95206 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH8O95206 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
PCDH8O95206 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH8O95206 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDH8O95206 LINC01971-201ENST00000617888 1048 ntBASIC26.24■■□□□ 1.79
PCDH8O95206 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH8O95206 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH8O95206 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH8O95206 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.22■■□□□ 1.79
PCDH8O95206 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDH8O95206 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH8O95206 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.21■■□□□ 1.79
PCDH8O95206 DUX4L11-201ENST00000611504 1267 ntBASIC26.21■■□□□ 1.79
PCDH8O95206 DUX4L12-201ENST00000614593 1267 ntBASIC26.21■■□□□ 1.79
PCDH8O95206 DUX4L14-201ENST00000621227 1267 ntBASIC26.21■■□□□ 1.79
PCDH8O95206 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH8O95206 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDH8O95206 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDH8O95206 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PCDH8O95206 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH8O95206 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH8O95206 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH8O95206 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDH8O95206 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PCDH8O95206 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDH8O95206 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDH8O95206 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDH8O95206 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDH8O95206 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDH8O95206 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDH8O95206 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.15■■□□□ 1.78
PCDH8O95206 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
PCDH8O95206 MIR3648-2-201ENST00000581792 180 ntBASIC26.14■■□□□ 1.78
PCDH8O95206 MIR3648-1-201ENST00000615959 180 ntBASIC26.14■■□□□ 1.78
PCDH8O95206 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PCDH8O95206 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.13■■□□□ 1.77
PCDH8O95206 AC016575.1-201ENST00000607026 382 ntBASIC26.13■■□□□ 1.77
PCDH8O95206 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.12■■□□□ 1.77
PCDH8O95206 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH8O95206 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDH8O95206 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH8O95206 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH8O95206 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
PCDH8O95206 AL135925.1-201ENST00000605920 1701 ntBASIC26.1■■□□□ 1.77
PCDH8O95206 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH8O95206 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH8O95206 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDH8O95206 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH8O95206 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH8O95206 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH8O95206 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH8O95206 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.08■■□□□ 1.77
PCDH8O95206 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
PCDH8O95206 CR559946.2-201ENST00000623684 991 ntBASIC26.08■■□□□ 1.77
PCDH8O95206 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH8O95206 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH8O95206 MIR639-201ENST00000384974 98 ntBASIC26.07■■□□□ 1.76
PCDH8O95206 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH8O95206 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH8O95206 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.05■■□□□ 1.76
PCDH8O95206 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDH8O95206 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.04■■□□□ 1.76
PCDH8O95206 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH8O95206 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH8O95206 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH8O95206 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms