Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.84■□□□□ 0.45
SNCGO76070 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNCGO76070 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNCGO76070 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNCGO76070 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.83■□□□□ 0.44
SNCGO76070 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.82■□□□□ 0.44
SNCGO76070 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNCGO76070 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNCGO76070 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SNCGO76070 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNCGO76070 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNCGO76070 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNCGO76070 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNCGO76070 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNCGO76070 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNCGO76070 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNCGO76070 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNCGO76070 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNCGO76070 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.78■□□□□ 0.44
SNCGO76070 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNCGO76070 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SNCGO76070 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.77■□□□□ 0.44
SNCGO76070 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNCGO76070 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.77■□□□□ 0.44
SNCGO76070 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNCGO76070 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SNCGO76070 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNCGO76070 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.76■□□□□ 0.43
SNCGO76070 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNCGO76070 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNCGO76070 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNCGO76070 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNCGO76070 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNCGO76070 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNCGO76070 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SNCGO76070 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNCGO76070 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNCGO76070 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNCGO76070 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNCGO76070 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNCGO76070 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNCGO76070 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
SNCGO76070 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCGO76070 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCGO76070 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNCGO76070 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNCGO76070 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNCGO76070 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCGO76070 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.69■□□□□ 0.42
SNCGO76070 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
SNCGO76070 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNCGO76070 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SNCGO76070 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNCGO76070 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SNCGO76070 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNCGO76070 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCGO76070 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCGO76070 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNCGO76070 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCGO76070 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.67■□□□□ 0.42
SNCGO76070 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNCGO76070 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNCGO76070 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNCGO76070 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCGO76070 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCGO76070 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNCGO76070 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNCGO76070 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNCGO76070 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
SNCGO76070 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNCGO76070 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.64■□□□□ 0.41
SNCGO76070 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.63■□□□□ 0.41
SNCGO76070 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCGO76070 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCGO76070 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNCGO76070 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC17.63■□□□□ 0.41
SNCGO76070 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.63■□□□□ 0.41
SNCGO76070 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.62■□□□□ 0.41
SNCGO76070 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCGO76070 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNCGO76070 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.62■□□□□ 0.41
SNCGO76070 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCGO76070 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNCGO76070 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNCGO76070 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC17.6■□□□□ 0.41
SNCGO76070 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SNCGO76070 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNCGO76070 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.59■□□□□ 0.41
SNCGO76070 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNCGO76070 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNCGO76070 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.58■□□□□ 0.41
SNCGO76070 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNCGO76070 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNCGO76070 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.58■□□□□ 0.4
SNCGO76070 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNCGO76070 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNCGO76070 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SNCGO76070 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNCGO76070 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms