Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE3O75131 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.12■■□□□ 1.61
CPNE3O75131 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.12■■□□□ 1.61
CPNE3O75131 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPNE3O75131 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
CPNE3O75131 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPNE3O75131 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE3O75131 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CPNE3O75131 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPNE3O75131 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CPNE3O75131 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPNE3O75131 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.09■■□□□ 1.61
CPNE3O75131 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.09■■□□□ 1.61
CPNE3O75131 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPNE3O75131 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CPNE3O75131 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CPNE3O75131 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CPNE3O75131 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.08■■□□□ 1.61
CPNE3O75131 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CPNE3O75131 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
CPNE3O75131 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE3O75131 AL161658.1-201ENST00000623641 1967 ntBASIC25.06■■□□□ 1.6
CPNE3O75131 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE3O75131 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CPNE3O75131 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CPNE3O75131 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE3O75131 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE3O75131 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE3O75131 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE3O75131 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE3O75131 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE3O75131 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE3O75131 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.04■■□□□ 1.6
CPNE3O75131 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE3O75131 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE3O75131 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE3O75131 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.03■■□□□ 1.6
CPNE3O75131 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE3O75131 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE3O75131 LINC01971-201ENST00000617888 1048 ntBASIC25.02■■□□□ 1.6
CPNE3O75131 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.02■■□□□ 1.6
CPNE3O75131 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPNE3O75131 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25■■□□□ 1.59
CPNE3O75131 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPNE3O75131 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.99■■□□□ 1.59
CPNE3O75131 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE3O75131 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE3O75131 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.98■■□□□ 1.59
CPNE3O75131 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.97■■□□□ 1.59
CPNE3O75131 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPNE3O75131 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.97■■□□□ 1.59
CPNE3O75131 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPNE3O75131 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CPNE3O75131 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.95■■□□□ 1.58
CPNE3O75131 DUX4L11-201ENST00000611504 1267 ntBASIC24.95■■□□□ 1.58
CPNE3O75131 DUX4L12-201ENST00000614593 1267 ntBASIC24.95■■□□□ 1.58
CPNE3O75131 DUX4L14-201ENST00000621227 1267 ntBASIC24.95■■□□□ 1.58
CPNE3O75131 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CPNE3O75131 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.94■■□□□ 1.58
CPNE3O75131 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.94■■□□□ 1.58
CPNE3O75131 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CPNE3O75131 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CPNE3O75131 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPNE3O75131 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.92■■□□□ 1.58
CPNE3O75131 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CPNE3O75131 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE3O75131 MIR3648-2-201ENST00000581792 180 ntBASIC24.91■■□□□ 1.58
CPNE3O75131 MIR3648-1-201ENST00000615959 180 ntBASIC24.91■■□□□ 1.58
CPNE3O75131 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CPNE3O75131 MIR639-201ENST00000384974 98 ntBASIC24.9■■□□□ 1.58
CPNE3O75131 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.9■■□□□ 1.58
CPNE3O75131 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.9■■□□□ 1.58
CPNE3O75131 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE3O75131 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.89■■□□□ 1.58
CPNE3O75131 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPNE3O75131 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPNE3O75131 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.89■■□□□ 1.57
CPNE3O75131 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPNE3O75131 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.88■■□□□ 1.57
CPNE3O75131 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CPNE3O75131 AC016575.1-201ENST00000607026 382 ntBASIC24.88■■□□□ 1.57
CPNE3O75131 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE3O75131 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.87■■□□□ 1.57
CPNE3O75131 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE3O75131 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE3O75131 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE3O75131 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE3O75131 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE3O75131 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.86■■□□□ 1.57
CPNE3O75131 CR559946.2-201ENST00000623684 991 ntBASIC24.86■■□□□ 1.57
CPNE3O75131 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPNE3O75131 MIR4449-201ENST00000578365 66 ntBASIC24.85■■□□□ 1.57
CPNE3O75131 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.85■■□□□ 1.57
CPNE3O75131 AC010864.1-201ENST00000609407 1511 ntBASIC24.84■■□□□ 1.57
CPNE3O75131 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPNE3O75131 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPNE3O75131 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPNE3O75131 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CPNE3O75131 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.81■■□□□ 1.56
CPNE3O75131 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms