Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LRP4O75096 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
LRP4O75096 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.94■■□□□ 1.74
LRP4O75096 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LRP4O75096 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LRP4O75096 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LRP4O75096 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LRP4O75096 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.92■■□□□ 1.74
LRP4O75096 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.92■■□□□ 1.74
LRP4O75096 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LRP4O75096 AC010864.1-201ENST00000609407 1511 ntBASIC25.89■■□□□ 1.74
LRP4O75096 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
LRP4O75096 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.89■■□□□ 1.74
LRP4O75096 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.88■■□□□ 1.73
LRP4O75096 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.88■■□□□ 1.73
LRP4O75096 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.88■■□□□ 1.73
LRP4O75096 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.88■■□□□ 1.73
LRP4O75096 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LRP4O75096 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LRP4O75096 CR559946.2-201ENST00000623684 991 ntBASIC25.87■■□□□ 1.73
LRP4O75096 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LRP4O75096 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRP4O75096 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
LRP4O75096 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRP4O75096 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRP4O75096 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.84■■□□□ 1.73
LRP4O75096 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
LRP4O75096 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.84■■□□□ 1.73
LRP4O75096 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
LRP4O75096 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.83■■□□□ 1.73
LRP4O75096 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.83■■□□□ 1.73
LRP4O75096 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRP4O75096 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.82■■□□□ 1.72
LRP4O75096 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.82■■□□□ 1.72
LRP4O75096 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.82■■□□□ 1.72
LRP4O75096 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LRP4O75096 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.81■■□□□ 1.72
LRP4O75096 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.81■■□□□ 1.72
LRP4O75096 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.81■■□□□ 1.72
LRP4O75096 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.8■■□□□ 1.72
LRP4O75096 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LRP4O75096 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LRP4O75096 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LRP4O75096 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.79■■□□□ 1.72
LRP4O75096 LINC01971-201ENST00000617888 1048 ntBASIC25.78■■□□□ 1.72
LRP4O75096 MIR3648-2-201ENST00000581792 180 ntBASIC25.78■■□□□ 1.72
LRP4O75096 MIR3648-1-201ENST00000615959 180 ntBASIC25.78■■□□□ 1.72
LRP4O75096 AC016575.1-201ENST00000607026 382 ntBASIC25.77■■□□□ 1.72
LRP4O75096 LINC00273-201ENST00000539813 1452 ntBASIC25.77■■□□□ 1.72
LRP4O75096 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRP4O75096 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRP4O75096 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRP4O75096 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRP4O75096 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.76■■□□□ 1.71
LRP4O75096 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRP4O75096 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRP4O75096 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRP4O75096 DUX4L11-201ENST00000611504 1267 ntBASIC25.75■■□□□ 1.71
LRP4O75096 DUX4L12-201ENST00000614593 1267 ntBASIC25.75■■□□□ 1.71
LRP4O75096 DUX4L14-201ENST00000621227 1267 ntBASIC25.75■■□□□ 1.71
LRP4O75096 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRP4O75096 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LRP4O75096 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRP4O75096 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LRP4O75096 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LRP4O75096 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRP4O75096 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
LRP4O75096 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRP4O75096 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRP4O75096 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.71■■□□□ 1.71
LRP4O75096 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.71■■□□□ 1.71
LRP4O75096 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
LRP4O75096 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.7■■□□□ 1.7
LRP4O75096 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRP4O75096 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.69■■□□□ 1.7
LRP4O75096 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
LRP4O75096 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
LRP4O75096 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRP4O75096 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
LRP4O75096 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRP4O75096 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRP4O75096 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRP4O75096 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LRP4O75096 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.67■■□□□ 1.7
LRP4O75096 MIR4449-201ENST00000578365 66 ntBASIC25.67■■□□□ 1.7
LRP4O75096 AL135925.1-201ENST00000605920 1701 ntBASIC25.66■■□□□ 1.7
LRP4O75096 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRP4O75096 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
LRP4O75096 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRP4O75096 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.65■■□□□ 1.7
LRP4O75096 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
LRP4O75096 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
LRP4O75096 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
LRP4O75096 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRP4O75096 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRP4O75096 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRP4O75096 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRP4O75096 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRP4O75096 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRP4O75096 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms