Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.06■□□□□ 0.96
UPK2O00526 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPK2O00526 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK2O00526 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK2O00526 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK2O00526 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK2O00526 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK2O00526 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UPK2O00526 AL139393.2-201ENST00000608721 2025 ntBASIC21.04■□□□□ 0.96
UPK2O00526 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.04■□□□□ 0.96
UPK2O00526 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK2O00526 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK2O00526 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK2O00526 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
UPK2O00526 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK2O00526 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK2O00526 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK2O00526 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK2O00526 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK2O00526 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UPK2O00526 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK2O00526 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPK2O00526 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK2O00526 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK2O00526 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK2O00526 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK2O00526 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UPK2O00526 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK2O00526 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK2O00526 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK2O00526 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.98■□□□□ 0.95
UPK2O00526 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK2O00526 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK2O00526 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK2O00526 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK2O00526 AC142086.6-201ENST00000621154 1765 ntBASIC20.96■□□□□ 0.95
UPK2O00526 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK2O00526 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK2O00526 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
UPK2O00526 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.94■□□□□ 0.94
UPK2O00526 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
UPK2O00526 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.94■□□□□ 0.94
UPK2O00526 AL391121.1-201ENST00000607967 1349 ntBASIC20.94■□□□□ 0.94
UPK2O00526 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.94■□□□□ 0.94
UPK2O00526 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK2O00526 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.93■□□□□ 0.94
UPK2O00526 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UPK2O00526 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.92■□□□□ 0.94
UPK2O00526 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
UPK2O00526 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.92■□□□□ 0.94
UPK2O00526 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK2O00526 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK2O00526 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPK2O00526 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.91■□□□□ 0.94
UPK2O00526 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.91■□□□□ 0.94
UPK2O00526 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK2O00526 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK2O00526 CAHM-201ENST00000604200 896 ntBASIC20.9■□□□□ 0.94
UPK2O00526 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UPK2O00526 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.9■□□□□ 0.94
UPK2O00526 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UPK2O00526 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPK2O00526 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK2O00526 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK2O00526 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPK2O00526 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UPK2O00526 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPK2O00526 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPK2O00526 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPK2O00526 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UPK2O00526 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK2O00526 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK2O00526 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.86■□□□□ 0.93
UPK2O00526 AC136428.2-201ENST00000563187 214 ntBASIC20.86■□□□□ 0.93
UPK2O00526 AC097358.2-201ENST00000607541 1159 ntBASIC20.86■□□□□ 0.93
UPK2O00526 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPK2O00526 DRD5P2-201ENST00000421395 2012 ntBASIC20.85■□□□□ 0.93
UPK2O00526 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
UPK2O00526 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.84■□□□□ 0.93
UPK2O00526 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK2O00526 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.84■□□□□ 0.93
UPK2O00526 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK2O00526 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.84■□□□□ 0.93
UPK2O00526 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK2O00526 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK2O00526 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPK2O00526 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPK2O00526 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
UPK2O00526 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
UPK2O00526 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPK2O00526 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UPK2O00526 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK2O00526 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.81■□□□□ 0.92
UPK2O00526 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK2O00526 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK2O00526 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPK2O00526 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.79■□□□□ 0.92
UPK2O00526 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK2O00526 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPK2O00526 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms