Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 AC135731.1-201ENST00000569415 2548 ntBASIC17.36■□□□□ 0.37
TRAV13-2A0A0B4J235 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV13-2A0A0B4J235 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRAV13-2A0A0B4J235 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-2A0A0B4J235 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-2A0A0B4J235 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-2A0A0B4J235 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV13-2A0A0B4J235 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV13-2A0A0B4J235 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV13-2A0A0B4J235 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV13-2A0A0B4J235 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV13-2A0A0B4J235 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV13-2A0A0B4J235 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV13-2A0A0B4J235 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV13-2A0A0B4J235 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV13-2A0A0B4J235 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV13-2A0A0B4J235 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV13-2A0A0B4J235 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 AC015813.7-201ENST00000623294 581 ntBASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV13-2A0A0B4J235 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV13-2A0A0B4J235 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV13-2A0A0B4J235 AL135925.1-201ENST00000605920 1701 ntBASIC17.27■□□□□ 0.35
TRAV13-2A0A0B4J235 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV13-2A0A0B4J235 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV13-2A0A0B4J235 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV13-2A0A0B4J235 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV13-2A0A0B4J235 INO80B-203ENST00000409917 796 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV13-2A0A0B4J235 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV13-2A0A0B4J235 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV13-2A0A0B4J235 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-2A0A0B4J235 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-2A0A0B4J235 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV13-2A0A0B4J235 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV13-2A0A0B4J235 DRD5P2-201ENST00000421395 2012 ntBASIC17.23■□□□□ 0.35
TRAV13-2A0A0B4J235 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV13-2A0A0B4J235 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV13-2A0A0B4J235 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-2A0A0B4J235 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV13-2A0A0B4J235 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-2A0A0B4J235 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV13-2A0A0B4J235 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV13-2A0A0B4J235 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-2A0A0B4J235 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV13-2A0A0B4J235 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-2A0A0B4J235 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV13-2A0A0B4J235 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV13-2A0A0B4J235 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-2A0A0B4J235 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-2A0A0B4J235 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-2A0A0B4J235 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV13-2A0A0B4J235 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV13-2A0A0B4J235 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV13-2A0A0B4J235 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV13-2A0A0B4J235 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV13-2A0A0B4J235 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV13-2A0A0B4J235 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV13-2A0A0B4J235 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV13-2A0A0B4J235 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.17■□□□□ 0.34
TRAV13-2A0A0B4J235 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV13-2A0A0B4J235 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV13-2A0A0B4J235 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV13-2A0A0B4J235 AL139393.2-201ENST00000608721 2025 ntBASIC17.16■□□□□ 0.34
TRAV13-2A0A0B4J235 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV13-2A0A0B4J235 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRAV13-2A0A0B4J235 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV13-2A0A0B4J235 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV13-2A0A0B4J235 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV13-2A0A0B4J235 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-2A0A0B4J235 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-2A0A0B4J235 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-2A0A0B4J235 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV13-2A0A0B4J235 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV13-2A0A0B4J235 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms