Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 UBE2DNL-204ENST00000602536 740 ntBASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 AC013268.1-206ENST00000638368 961 ntBASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 AC112229.1-201ENST00000639295 961 ntBASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00474Q9P2X8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 AL162412.1-201ENST00000567129 965 ntBASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00474Q9P2X8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC00474Q9P2X8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AL158211.5-201ENST00000623583 2518 ntBASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AC006015.1-201ENST00000429970 570 ntBASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 SLC7A5P2-201ENST00000553010 536 ntBASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AC022517.1-201ENST00000592429 346 ntBASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AC010536.3-201ENST00000620306 533 ntBASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00474Q9P2X8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 TERF1P5-201ENST00000477545 1207 ntBASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms