Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 MFSD11-216ENST00000590393 1141 ntBASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC010536.3-201ENST00000620306 533 ntBASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV23-1A0A0A0MS06 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 LETM1P2-201ENST00000597330 2178 ntBASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC011767.1-201ENST00000617410 1153 ntBASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC092437.1-201ENST00000624794 1048 ntBASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRBV23-1A0A0A0MS06 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 RBM17P2-201ENST00000616397 1405 ntBASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 IKBKGP1-201ENST00000612193 1073 ntBASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC013268.1-206ENST00000638368 961 ntBASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC112229.1-201ENST00000639295 961 ntBASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV23-1A0A0A0MS06 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.21■□□□□ 0.34
TRBV23-1A0A0A0MS06 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 TERF1P5-201ENST00000477545 1207 ntBASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV23-1A0A0A0MS06 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms