Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SH3TC1Q8TE82 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SH3TC1Q8TE82 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 AC008550.1-201ENST00000511500 884 ntBASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 C1QBPP2-201ENST00000528754 825 ntBASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 RN7SL471P-201ENST00000580476 299 ntBASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 AC069544.1-201ENST00000609399 999 ntBASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.7■■□□□ 1.71
SH3TC1Q8TE82 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SH3TC1Q8TE82 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.69■■□□□ 1.7
SH3TC1Q8TE82 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3TC1Q8TE82 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 PGM5P4-201ENST00000421970 445 ntBASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.67■■□□□ 1.7
SH3TC1Q8TE82 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 POM121L13P-201ENST00000422362 380 ntBASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 FAM197Y4-202ENST00000622692 608 ntBASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 LINC00565-201ENST00000562710 2331 ntBASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3TC1Q8TE82 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3TC1Q8TE82 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.64■■□□□ 1.7
SH3TC1Q8TE82 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms