Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SIP18YMR175W 240 nt2.49□□□□□ -2.01
RPT4P53549 RGM1YMR182C 636 nt2.49□□□□□ -2.01
RPT4P53549 RPL36AYMR194W 303 nt2.49□□□□□ -2.01
RPT4P53549 YNR021WYNR021W 1215 nt2.49□□□□□ -2.01
RPT4P53549 MPP6YNR024W 561 nt2.49□□□□□ -2.01
RPT4P53549 OST2YOR103C 393 nt2.49□□□□□ -2.01
RPT4P53549 ALG14YBR070C 714 nt2.49□□□□□ -2.01
RPT4P53549 BNR1YIL159W 4128 nt2.49□□□□□ -2.01
RPT4P53549 GYP5YPL249C 2685 nt2.49□□□□□ -2.01
RPT4P53549 UBP15YMR304W 3693 nt2.49□□□□□ -2.01
RPT4P53549 STD1YOR047C 1335 nt2.48□□□□□ -2.01
RPT4P53549 SDC25YLL016W 3147 nt2.48□□□□□ -2.01
RPT4P53549 IRC2YDR112W 309 nt2.48□□□□□ -2.01
RPT4P53549 CKA1YIL035C 1119 nt2.48□□□□□ -2.01
RPT4P53549 SYS1YJL004C 612 nt2.48□□□□□ -2.01
RPT4P53549 YKL023C-AYKL023C-A 228 nt2.48□□□□□ -2.01
RPT4P53549 YNL179CYNL179C 438 nt2.48□□□□□ -2.01
RPT4P53549 YOR364WYOR364W 369 nt2.48□□□□□ -2.01
RPT4P53549 YPL034WYPL034W 498 nt2.48□□□□□ -2.01
RPT4P53549 ACM1YPL267W 630 nt2.48□□□□□ -2.01
RPT4P53549 YIL166CYIL166C 1629 nt2.48□□□□□ -2.01
RPT4P53549 SGM1YJR134C 2124 nt2.47□□□□□ -2.01
RPT4P53549 RRI2YOL117W 1938 nt2.47□□□□□ -2.01
RPT4P53549 GLC7YER133W 939 nt2.47□□□□□ -2.01
RPT4P53549 CSE4YKL049C 690 nt2.47□□□□□ -2.01
RPT4P53549 YAL059C-AYAL059C-A 423 nt2.47□□□□□ -2.01
RPT4P53549 GMC2YLR445W 567 nt2.47□□□□□ -2.01
RPT4P53549 SAS2YMR127C 1017 nt2.47□□□□□ -2.01
RPT4P53549 MSS18YPR134W 807 nt2.47□□□□□ -2.01
RPT4P53549 TOP2YNL088W 4287 nt2.47□□□□□ -2.01
RPT4P53549 BAS1YKR099W 2436 nt2.47□□□□□ -2.01
RPT4P53549 VPS13YLL040C 9435 nt2.46□□□□□ -2.02
RPT4P53549 UBC5YDR059C 447 nt2.46□□□□□ -2.02
RPT4P53549 YGL042CYGL042C 306 nt2.46□□□□□ -2.02
RPT4P53549 VPH2YKL119C 648 nt2.46□□□□□ -2.02
RPT4P53549 YNL046WYNL046W 519 nt2.46□□□□□ -2.02
RPT4P53549 SWM2YNR004W 441 nt2.46□□□□□ -2.02
RPT4P53549 MF(ALPHA)1YPL187W 498 nt2.46□□□□□ -2.02
RPT4P53549 AMS1YGL156W 3252 nt2.45□□□□□ -2.02
RPT4P53549 OCA6YDR067C 675 nt2.45□□□□□ -2.02
RPT4P53549 SLX9YGR081C 633 nt2.45□□□□□ -2.02
RPT4P53549 YJL052C-AYJL052C-A 120 nt2.45□□□□□ -2.02
RPT4P53549 CRS5YOR031W 210 nt2.45□□□□□ -2.02
RPT4P53549 YPL039WYPL039W 951 nt2.45□□□□□ -2.02
RPT4P53549 ARR2YPR200C 393 nt2.45□□□□□ -2.02
RPT4P53549 AFR1YDR085C 1863 nt2.44□□□□□ -2.02
RPT4P53549 YDL009CYDL009C 324 nt2.44□□□□□ -2.02
RPT4P53549 PEX4YGR133W 552 nt2.44□□□□□ -2.02
RPT4P53549 PRS3YHL011C 963 nt2.44□□□□□ -2.02
RPT4P53549 YAL026C-AYAL026C-A 438 nt2.44□□□□□ -2.02
RPT4P53549 HRI1YLR301W 735 nt2.44□□□□□ -2.02
RPT4P53549 YLR302CYLR302C 363 nt2.44□□□□□ -2.02
RPT4P53549 RIO2YNL207W 1278 nt2.44□□□□□ -2.02
RPT4P53549 YKU80YMR106C 1890 nt2.43□□□□□ -2.02
RPT4P53549 DNF1YER166W 4716 nt2.43□□□□□ -2.02
RPT4P53549 YGR050CYGR050C 357 nt2.43□□□□□ -2.02
RPT4P53549 LRP1YHR081W 555 nt2.43□□□□□ -2.02
RPT4P53549 DFG10YIL049W 762 nt2.43□□□□□ -2.02
RPT4P53549 RNP1YLL046C 750 nt2.43□□□□□ -2.02
RPT4P53549 RPS29AYLR388W 171 nt2.43□□□□□ -2.02
RPT4P53549 HHT2YNL031C 411 nt2.43□□□□□ -2.02
RPT4P53549 NSL1YPL233W 651 nt2.43□□□□□ -2.02
RPT4P53549 YPR145C-AYPR145C-A 237 nt2.43□□□□□ -2.02
RPT4P53549 SMY2YBR172C 2223 nt2.43□□□□□ -2.02
RPT4P53549 SSF2YDR312W 1362 nt2.43□□□□□ -2.02
RPT4P53549 PEX8YGR077C 1770 nt2.43□□□□□ -2.02
RPT4P53549 FAR11YNL127W 2862 nt2.43□□□□□ -2.02
RPT4P53549 YNL034WYNL034W 1839 nt2.42□□□□□ -2.02
RPT4P53549 SAK1YER129W 3429 nt2.42□□□□□ -2.02
RPT4P53549 YDL187CYDL187C 330 nt2.42□□□□□ -2.02
RPT4P53549 YDR199WYDR199W 366 nt2.42□□□□□ -2.02
RPT4P53549 COG2YGR120C 789 nt2.42□□□□□ -2.02
RPT4P53549 SCEIQ0160 708 nt2.42□□□□□ -2.02
RPT4P53549 ANS1YHR126C 480 nt2.42□□□□□ -2.02
RPT4P53549 YJL202CYJL202C 348 nt2.42□□□□□ -2.02
RPT4P53549 KIP1YBL063W 3336 nt2.42□□□□□ -2.02
RPT4P53549 HOS4YIL112W 3252 nt2.42□□□□□ -2.02
RPT4P53549 RGA2YDR379W 3030 nt2.42□□□□□ -2.02
RPT4P53549 LEU3YLR451W 2661 nt2.41□□□□□ -2.02
RPT4P53549 SIR3YLR442C 2937 nt2.41□□□□□ -2.02
RPT4P53549 YMR304C-AYMR304C-A 351 nt2.41□□□□□ -2.02
RPT4P53549 TRM7YBR061C 933 nt2.41□□□□□ -2.02
RPT4P53549 YPR153WYPR153W 423 nt2.41□□□□□ -2.02
RPT4P53549 PSD2YGR170W 3417 nt2.4□□□□□ -2.02
RPT4P53549 ORC2YBR060C 1863 nt2.4□□□□□ -2.03
RPT4P53549 YCR108CYCR108C 192 nt2.4□□□□□ -2.03
RPT4P53549 CHZ1YER030W 462 nt2.4□□□□□ -2.03
RPT4P53549 YER119C-AYER119C-A 372 nt2.4□□□□□ -2.03
RPT4P53549 SWA2YDR320C 2007 nt2.4□□□□□ -2.03
RPT4P53549 SWR1YDR334W 4545 nt2.4□□□□□ -2.03
RPT4P53549 ECM5YMR176W 4236 nt2.4□□□□□ -2.03
RPT4P53549 PSO2YMR137C 1986 nt2.4□□□□□ -2.03
RPT4P53549 YDR029WYDR029W 315 nt2.39□□□□□ -2.03
RPT4P53549 LSM2YBL026W 288 nt2.39□□□□□ -2.03
RPT4P53549 YMR013C-AYMR013C-A 150 nt2.39□□□□□ -2.03
RPT4P53549 ERG29YMR134W 714 nt2.39□□□□□ -2.03
RPT4P53549 SWS2YNL081C 432 nt2.39□□□□□ -2.03
RPT4P53549 RPL25YOL127W 429 nt2.39□□□□□ -2.03
RPT4P53549 YBR197CYBR197C 654 nt2.39□□□□□ -2.03
RPT4P53549 KOG1YHR186C 4674 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms