Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YJL169WYJL169W 369 nt0.84□□□□□ -2.28
VTH1P40438 YDR338CYDR338C 2088 nt0.83□□□□□ -2.28
VTH1P40438 RPS18BYML026C 441 nt0.83□□□□□ -2.28
VTH1P40438 COG8YML071C 1824 nt0.82□□□□□ -2.28
VTH1P40438 IFH1YLR223C 3258 nt0.82□□□□□ -2.28
VTH1P40438 UBC13YDR092W 462 nt0.82□□□□□ -2.28
VTH1P40438 NBL1YHR199C-A 222 nt0.82□□□□□ -2.28
VTH1P40438 GPN3YLR243W 819 nt0.82□□□□□ -2.28
VTH1P40438 ZRG8YER033C 3231 nt0.82□□□□□ -2.28
VTH1P40438 ESC2YDR363W 1371 nt0.81□□□□□ -2.28
VTH1P40438 AVT5YBL089W 1380 nt0.81□□□□□ -2.28
VTH1P40438 RPA12YJR063W 378 nt0.81□□□□□ -2.28
VTH1P40438 MSA2YKR077W 1092 nt0.81□□□□□ -2.28
VTH1P40438 UBX4YMR067C 1251 nt0.81□□□□□ -2.28
VTH1P40438 YOR314WYOR314W 330 nt0.81□□□□□ -2.28
VTH1P40438 GTR2YGR163W 1026 nt0.8□□□□□ -2.28
VTH1P40438 HHT2YNL031C 411 nt0.8□□□□□ -2.28
VTH1P40438 ALY2YJL084C 3141 nt0.8□□□□□ -2.28
VTH1P40438 SDC1YDR469W 528 nt0.79□□□□□ -2.28
VTH1P40438 VOA1YGR106C 798 nt0.79□□□□□ -2.28
VTH1P40438 CSM2YIL132C 642 nt0.79□□□□□ -2.28
VTH1P40438 YPL238CYPL238C 390 nt0.79□□□□□ -2.28
VTH1P40438 YDL062WYDL062W 426 nt0.79□□□□□ -2.28
VTH1P40438 YGR039WYGR039W 312 nt0.79□□□□□ -2.28
VTH1P40438 CLC1YGR167W 702 nt0.79□□□□□ -2.28
VTH1P40438 RRT15YLR162W-A 189 nt0.79□□□□□ -2.28
VTH1P40438 YNL054W-BYNL054W-B 5250 nt0.78□□□□□ -2.28
VTH1P40438 YGR290WYGR290W 444 nt0.78□□□□□ -2.28
VTH1P40438 REV7YIL139C 738 nt0.78□□□□□ -2.28
VTH1P40438 VPS71YML041C 843 nt0.78□□□□□ -2.28
VTH1P40438 YNL228WYNL228W 777 nt0.78□□□□□ -2.28
VTH1P40438 PUF4YGL014W 2667 nt0.78□□□□□ -2.29
VTH1P40438 SHS1YDL225W 1656 nt0.78□□□□□ -2.29
VTH1P40438 TFA2YKR062W 987 nt0.77□□□□□ -2.29
VTH1P40438 PPN1YDR452W 2025 nt0.77□□□□□ -2.29
VTH1P40438 HAP4YKL109W 1665 nt0.76□□□□□ -2.29
VTH1P40438 YER078W-AYER078W-A 165 nt0.76□□□□□ -2.29
VTH1P40438 BSC2YDR275W 708 nt0.75□□□□□ -2.29
VTH1P40438 MGE1YOR232W 687 nt0.75□□□□□ -2.29
VTH1P40438 YOR263CYOR263C 408 nt0.75□□□□□ -2.29
VTH1P40438 YOR343W-BYOR343W-B 5313 nt0.75□□□□□ -2.29
VTH1P40438 UBP11YKR098C 2154 nt0.74□□□□□ -2.29
VTH1P40438 FSH1YHR049W 732 nt0.74□□□□□ -2.29
VTH1P40438 YUH1YJR099W 711 nt0.74□□□□□ -2.29
VTH1P40438 RKR1YMR247C 4689 nt0.74□□□□□ -2.29
VTH1P40438 CRD1YDL142C 852 nt0.74□□□□□ -2.29
VTH1P40438 AIM6YDL237W 1173 nt0.74□□□□□ -2.29
VTH1P40438 RPC11YDR045C 333 nt0.74□□□□□ -2.29
VTH1P40438 YKL156C-AYKL156C-A 117 nt0.74□□□□□ -2.29
VTH1P40438 UPS2YLR168C 693 nt0.74□□□□□ -2.29
VTH1P40438 SRL1YOR247W 633 nt0.74□□□□□ -2.29
VTH1P40438 PRM4YPL156C 855 nt0.74□□□□□ -2.29
VTH1P40438 FIP1YJR093C 984 nt0.73□□□□□ -2.29
VTH1P40438 YKR075W-AYKR075W-A 270 nt0.73□□□□□ -2.29
VTH1P40438 MED8YBR193C 672 nt0.73□□□□□ -2.29
VTH1P40438 YDL183CYDL183C 963 nt0.72□□□□□ -2.29
VTH1P40438 YER119C-AYER119C-A 372 nt0.72□□□□□ -2.29
VTH1P40438 VTI1YMR197C 654 nt0.72□□□□□ -2.29
VTH1P40438 VMA5YKL080W 1179 nt0.71□□□□□ -2.3
VTH1P40438 HUB1YNR032C-A 222 nt0.71□□□□□ -2.3
VTH1P40438 snR14snR14 160 nt0.71□□□□□ -2.3
VTH1P40438 PIN4YBL051C 2007 nt0.71□□□□□ -2.3
VTH1P40438 YDL186WYDL186W 834 nt0.7□□□□□ -2.3
VTH1P40438 PET130YJL023C 1044 nt0.7□□□□□ -2.3
VTH1P40438 MLH3YPL164C 2148 nt0.7□□□□□ -2.3
VTH1P40438 YER107W-AYER107W-A 321 nt0.69□□□□□ -2.3
VTH1P40438 YOR062CYOR062C 807 nt0.69□□□□□ -2.3
VTH1P40438 PRP39YML046W 1890 nt0.69□□□□□ -2.3
VTH1P40438 BST1YFL025C 3090 nt0.69□□□□□ -2.3
VTH1P40438 SVP26YHR181W 687 nt0.69□□□□□ -2.3
VTH1P40438 ASI3YNL008C 2031 nt0.68□□□□□ -2.3
VTH1P40438 PCL9YDL179W 915 nt0.68□□□□□ -2.3
VTH1P40438 CTK3YML112W 891 nt0.68□□□□□ -2.3
VTH1P40438 YDL050CYDL050C 372 nt0.67□□□□□ -2.3
VTH1P40438 PBP4YDL053C 558 nt0.66□□□□□ -2.3
VTH1P40438 YGR273CYGR273C 525 nt0.66□□□□□ -2.3
VTH1P40438 YMR052C-AYMR052C-A 366 nt0.66□□□□□ -2.3
VTH1P40438 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
VTH1P40438 EST2YLR318W 2655 nt0.66□□□□□ -2.3
VTH1P40438 YML002WYML002W 2214 nt0.66□□□□□ -2.3
VTH1P40438 SEC63YOR254C 1992 nt0.65□□□□□ -2.3
VTH1P40438 UBC9YDL064W 474 nt0.65□□□□□ -2.31
VTH1P40438 HIR3YJR140C 4947 nt0.65□□□□□ -2.31
VTH1P40438 RED1YLR263W 2484 nt0.65□□□□□ -2.31
VTH1P40438 YDR018CYDR018C 1191 nt0.64□□□□□ -2.31
VTH1P40438 PRM9YAR031W 897 nt0.64□□□□□ -2.31
VTH1P40438 DYN3YMR299C 939 nt0.64□□□□□ -2.31
VTH1P40438 MUS81YDR386W 1899 nt0.64□□□□□ -2.31
VTH1P40438 MFB1YDR219C 1398 nt0.64□□□□□ -2.31
VTH1P40438 UIP3YAR027W 708 nt0.64□□□□□ -2.31
VTH1P40438 BNA7YDR428C 786 nt0.63□□□□□ -2.31
VTH1P40438 YOR152CYOR152C 771 nt0.63□□□□□ -2.31
VTH1P40438 LTP1YPR073C 486 nt0.63□□□□□ -2.31
VTH1P40438 SHU2YDR078C 672 nt0.61□□□□□ -2.31
VTH1P40438 FMN1YDR236C 657 nt0.61□□□□□ -2.31
VTH1P40438 PCL6YER059W 1263 nt0.61□□□□□ -2.31
VTH1P40438 USV1YPL230W 1176 nt0.61□□□□□ -2.31
VTH1P40438 UBC5YDR059C 447 nt0.6□□□□□ -2.31
VTH1P40438 SFT1YKL006C-A 294 nt0.6□□□□□ -2.31
VTH1P40438 YLR307C-AYLR307C-A 264 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms