RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene CSM2, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM2YIL132C MTC1P47018 478 aaKnown RBP24.17■■□□□ 1.46
CSM2YIL132C DRS1P32892 752 aaKnown RBP24.05■■□□□ 1.44
CSM2YIL132C BFR2Q06631 534 aaKnown RBP20.71■□□□□ 0.91
CSM2YIL132C DIP2Q12220 943 aaPredicted RBP20.56■□□□□ 0.88
CSM2YIL132C AVT3P36062 692 aa20.22■□□□□ 0.83
CSM2YIL132C FAP1P53971 965 aa20.09■□□□□ 0.81
CSM2YIL132C ISW2Q08773 1120 aa19.73■□□□□ 0.75
CSM2YIL132C PRI1P10363 409 aa19.54■□□□□ 0.72
CSM2YIL132C RSE1Q04693 1361 aaKnown RBP19.47■□□□□ 0.71
CSM2YIL132C RPG1P38249 964 aaKnown RBP19.47■□□□□ 0.71
CSM2YIL132C TFA1P36100 482 aa19.33■□□□□ 0.68
CSM2YIL132C AAD16Q02895 342 aa19.26■□□□□ 0.67
CSM2YIL132C PRY3P47033 881 aa18.81■□□□□ 0.6
CSM2YIL132C RPL17AP05740 184 aaKnown RBP18.75■□□□□ 0.59
CSM2YIL132C RPL17BP46990 184 aaKnown RBP18.75■□□□□ 0.59
CSM2YIL132C TSR3Q12094 313 aaKnown RBP18.56■□□□□ 0.56
CSM2YIL132C REB1P21538 810 aa18.53■□□□□ 0.56
CSM2YIL132C SPT21P35209 758 aa18.03■□□□□ 0.48
CSM2YIL132C MRPL32P25348 183 aa17.84■□□□□ 0.45
CSM2YIL132C YCK3P39962 524 aa17.77■□□□□ 0.44
CSM2YIL132C RIM101P33400 625 aa17.75■□□□□ 0.43
CSM2YIL132C HAA1Q12753 694 aaKnown RBP17.75■□□□□ 0.43
CSM2YIL132C YKR023WP36119 530 aaKnown RBP17.51■□□□□ 0.39
CSM2YIL132C OXP1P28273 1286 aa17.2■□□□□ 0.34
CSM2YIL132C CDC27P38042 758 aa17.19■□□□□ 0.34
CSM2YIL132C TFC8Q12308 588 aa17.16■□□□□ 0.34
CSM2YIL132C HOP09932 586 aa17.15■□□□□ 0.34
CSM2YIL132C DCD1P06773 312 aa17.01■□□□□ 0.31
CSM2YIL132C PTP3P40048 928 aa16.99■□□□□ 0.31
CSM2YIL132C YIL055CP40523 627 aaKnown RBP16.97■□□□□ 0.31
CSM2YIL132C YAH1Q12184 172 aaKnown RBP16.9■□□□□ 0.3
CSM2YIL132C SSP1P38871 571 aa16.87■□□□□ 0.29
CSM2YIL132C YGL015CP33199 130 aa16.7■□□□□ 0.26
CSM2YIL132C RSM7P47150 247 aa16.7■□□□□ 0.26
CSM2YIL132C YLR271WQ06152 274 aa16.68■□□□□ 0.26
CSM2YIL132C BCH2P36122 765 aa16.65■□□□□ 0.26
CSM2YIL132C ARP8Q12386 881 aaKnown RBP RIP-Chip data16.63■□□□□ 0.25not detected
CSM2YIL132C UBP10P53874 792 aaPredicted RBP16.53■□□□□ 0.24
CSM2YIL132C MAP2P38174 421 aaKnown RBP16.48■□□□□ 0.23
CSM2YIL132C SCY1P53009 804 aa16.43■□□□□ 0.22
CSM2YIL132C AI2P03876 854 aa16.42■□□□□ 0.22
CSM2YIL132C EPS1P40557 701 aa16.35■□□□□ 0.21
CSM2YIL132C BBC1P47068 1157 aa16.35■□□□□ 0.21
CSM2YIL132C MGA2P40578 1113 aa16.3■□□□□ 0.2
CSM2YIL132C PSD2P53037 1138 aaKnown RBP16.26■□□□□ 0.19
CSM2YIL132C BDF1P35817 686 aa16.24■□□□□ 0.19
CSM2YIL132C CST9Q06032 482 aa16.15■□□□□ 0.18
CSM2YIL132C RQC2Q12532 1038 aaKnown RBP16.15■□□□□ 0.18
CSM2YIL132C SLX5P32828 619 aaKnown RBP16.14■□□□□ 0.17
CSM2YIL132C MRM1P25270 412 aa15.9■□□□□ 0.14
CSM2YIL132C TIF4632P39936 914 aaKnown RBP15.85■□□□□ 0.13
CSM2YIL132C DMA1P38823 416 aa15.82■□□□□ 0.12
CSM2YIL132C TGL3P40308 642 aa15.75■□□□□ 0.11
CSM2YIL132C RTG3P38165 486 aa15.68■□□□□ 0.1
CSM2YIL132C RCR1P38212 213 aa15.62■□□□□ 0.09
CSM2YIL132C RAM2P29703 316 aa15.54■□□□□ 0.08
CSM2YIL132C VPS29P38759 282 aa15.52■□□□□ 0.08
CSM2YIL132C NSR1P27476 414 aaKnown RBP RIP-Chip data15.49■□□□□ 0.07not detected
CSM2YIL132C YMR1P47147 688 aaKnown RBP RIP-Chip data15.43■□□□□ 0.06not detected
CSM2YIL132C YAP5P40574 245 aa15.42■□□□□ 0.06
CSM2YIL132C YOR238WQ08634 303 aa15.37■□□□□ 0.05
CSM2YIL132C MAK11P20484 414 aaKnown RBP15.33■□□□□ 0.04
CSM2YIL132C DBP1P24784 617 aaKnown RBP15.32■□□□□ 0.04
CSM2YIL132C STS1P38637 319 aa15.31■□□□□ 0.04
CSM2YIL132C YFR006WP43590 535 aa15.27■□□□□ 0.04
CSM2YIL132C MST1P07236 462 aa15.25■□□□□ 0.03
CSM2YIL132C PIB1Q06651 286 aa15.23■□□□□ 0.03
CSM2YIL132C SET1P38827 1080 aaKnown RBP15.17■□□□□ 0.02
CSM2YIL132C COQ8P27697 501 aa15.12■□□□□ 0.01
CSM2YIL132C MIF2P35201 549 aa15.09■□□□□ 0.01
CSM2YIL132C SAS10Q12136 610 aaPredicted RBP15.07■□□□□ 0
CSM2YIL132C VMA1P17255 1071 aaKnown RBP15.04■□□□□ -0
CSM2YIL132C EDS1P38073 919 aa15.02■□□□□ -0
CSM2YIL132C GTT3P39996 337 aa15.02■□□□□ -0
CSM2YIL132C NOP53Q12080 455 aaKnown RBP14.99□□□□□ -0.01
CSM2YIL132C IFH1P39520 1085 aa14.94□□□□□ -0.02
CSM2YIL132C PTC3P34221 468 aaKnown RBP14.91□□□□□ -0.02
CSM2YIL132C YPR148CQ06523 435 aa14.9□□□□□ -0.02
CSM2YIL132C SAM3Q08986 587 aa14.9□□□□□ -0.02
CSM2YIL132C UBP9P39967 754 aa14.83□□□□□ -0.04
CSM2YIL132C VPS70P47161 811 aa14.83□□□□□ -0.04
CSM2YIL132C WSC3Q12215 556 aa14.8□□□□□ -0.04
CSM2YIL132C YOL036WQ08206 761 aa14.78□□□□□ -0.04
CSM2YIL132C GRE2Q12068 342 aaKnown RBP14.78□□□□□ -0.04
CSM2YIL132C GYP5Q12344 894 aa14.77□□□□□ -0.05
CSM2YIL132C YBL029C-AQ3E756 94 aa14.76□□□□□ -0.05
CSM2YIL132C ATH1P48016 1211 aa14.75□□□□□ -0.05
CSM2YIL132C SET4P42948 560 aa14.73□□□□□ -0.05
CSM2YIL132C CKB1P43639 278 aa14.72□□□□□ -0.05
CSM2YIL132C MSB4Q12317 492 aa14.72□□□□□ -0.05
CSM2YIL132C GUT1P32190 709 aa14.71□□□□□ -0.05
CSM2YIL132C VNX1P42839 908 aa14.69□□□□□ -0.06
CSM2YIL132C ABP1P15891 592 aaKnown RBP14.67□□□□□ -0.06
CSM2YIL132C BUD31P25337 157 aaPredicted RBP14.62□□□□□ -0.07
CSM2YIL132C DCW1P36091 449 aa14.62□□□□□ -0.07
CSM2YIL132C EAP1P36041 632 aaKnown RBP14.58□□□□□ -0.08
CSM2YIL132C SPP1Q03012 353 aa14.58□□□□□ -0.08
CSM2YIL132C HTA1P04911 132 aaKnown RBP14.56□□□□□ -0.08
CSM2YIL132C HTA2P04912 132 aa14.56□□□□□ -0.08
CSM2YIL132C TIF11P38912 153 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms