Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 TDA1YMR291W 1761 nt3.59□□□□□ -1.83 RIP-Chip
PUB1P32588 RPS29BYDL061C 171 nt3.59□□□□□ -1.83 RIP-Chip
PUB1P32588 PAU23YLR037C 375 nt3.59□□□□□ -1.83
PUB1P32588 VPS41YDR080W 2979 nt3.59□□□□□ -1.84
PUB1P32588 AIP1YMR092C 1848 nt3.58□□□□□ -1.84
PUB1P32588 DIP2YLR129W 2832 nt3.58□□□□□ -1.84
PUB1P32588 KEX1YGL203C 2190 nt3.58□□□□□ -1.84
PUB1P32588 GAC1YOR178C 2382 nt3.58□□□□□ -1.84
PUB1P32588 TFB5YDR079C-A 219 nt3.58□□□□□ -1.84
PUB1P32588 SMD1YGR074W 441 nt3.58□□□□□ -1.84
PUB1P32588 REV1YOR346W 2958 nt3.58□□□□□ -1.84
PUB1P32588 YLL007CYLL007C 1998 nt3.58□□□□□ -1.84
PUB1P32588 MES1YGR264C 2256 nt3.58□□□□□ -1.84 RIP-Chip
PUB1P32588 BUD5YCR038C 1929 nt3.57□□□□□ -1.84
PUB1P32588 TMA17YDL110C 453 nt3.57□□□□□ -1.84
PUB1P32588 YKR033CYKR033C 426 nt3.57□□□□□ -1.84
PUB1P32588 PEX11YOL147C 711 nt3.57□□□□□ -1.84 RIP-Chip
PUB1P32588 OPT2YPR194C 2634 nt3.57□□□□□ -1.84
PUB1P32588 YBR224WYBR224W 516 nt3.57□□□□□ -1.84
PUB1P32588 MSH4YFL003C 2637 nt3.57□□□□□ -1.84
PUB1P32588 MTC4YBR255W 2085 nt3.56□□□□□ -1.84
PUB1P32588 PIN4YBL051C 2007 nt3.56□□□□□ -1.84 RIP-Chip
PUB1P32588 AVT1YJR001W 1809 nt3.56□□□□□ -1.84
PUB1P32588 NUP60YAR002W 1620 nt3.56□□□□□ -1.84
PUB1P32588 snR60snR60 104 nt3.56□□□□□ -1.84
PUB1P32588 YDR246W-AYDR246W-A 201 nt3.56□□□□□ -1.84
PUB1P32588 YBR259WYBR259W 2067 nt3.56□□□□□ -1.84
PUB1P32588 BIT61YJL058C 1632 nt3.55□□□□□ -1.84
PUB1P32588 YGL217CYGL217C 342 nt3.55□□□□□ -1.84
PUB1P32588 RPS0AYGR214W 759 nt3.55□□□□□ -1.84
PUB1P32588 YMR321CYMR321C 318 nt3.55□□□□□ -1.84
PUB1P32588 RPL32YBL092W 393 nt3.55□□□□□ -1.84
PUB1P32588 TRM7YBR061C 933 nt3.55□□□□□ -1.84
PUB1P32588 AI5_ALPHAQ0070 1893 nt3.54□□□□□ -1.84
PUB1P32588 YDR230WYDR230W 348 nt3.54□□□□□ -1.84
PUB1P32588 PFK1YGR240C 2964 nt3.54□□□□□ -1.84 RIP-Chip
PUB1P32588 tT(UGU)Q1tT(UGU)Q1 76 nt3.54□□□□□ -1.84
PUB1P32588 RFC3YNL290W 1023 nt3.54□□□□□ -1.84
PUB1P32588 PDR12YPL058C 4536 nt3.54□□□□□ -1.84 RIP-Chip
PUB1P32588 SPT10YJL127C 1923 nt3.54□□□□□ -1.84
PUB1P32588 MIP6YHR015W 1980 nt3.53□□□□□ -1.84
PUB1P32588 YHR217CYHR217C 462 nt3.53□□□□□ -1.84
PUB1P32588 INA22YIR024C 651 nt3.53□□□□□ -1.84
PUB1P32588 YJL020W-AYJL020W-A 258 nt3.53□□□□□ -1.84
PUB1P32588 PCC1YKR095W-A 267 nt3.53□□□□□ -1.84
PUB1P32588 YOR381W-AYOR381W-A 168 nt3.53□□□□□ -1.84
PUB1P32588 DAP2YHR028C 2457 nt3.53□□□□□ -1.84
PUB1P32588 SRP68YPL243W 1800 nt3.53□□□□□ -1.84
PUB1P32588 GLN4YOR168W 2430 nt3.53□□□□□ -1.84
PUB1P32588 KIN2YLR096W 3444 nt3.52□□□□□ -1.85 RIP-Chip
PUB1P32588 PEX5YDR244W 1839 nt3.52□□□□□ -1.85
PUB1P32588 SWH1YAR042W 3567 nt3.52□□□□□ -1.85
PUB1P32588 FMP32YFL046W 624 nt3.52□□□□□ -1.85
PUB1P32588 SAE3YHR079C-A 276 nt3.52□□□□□ -1.85
PUB1P32588 LSM1YJL124C 519 nt3.52□□□□□ -1.85
PUB1P32588 snR52snR52 92 nt3.52□□□□□ -1.85
PUB1P32588 SRB4YER022W 2064 nt3.51□□□□□ -1.85
PUB1P32588 YLR154W-BYLR154W-B 165 nt3.51□□□□□ -1.85
PUB1P32588 YBR225WYBR225W 2703 nt3.51□□□□□ -1.85 RIP-Chip
PUB1P32588 MNR2YKL064W 2910 nt3.51□□□□□ -1.85 RIP-Chip
PUB1P32588 AIM9YER080W 1884 nt3.51□□□□□ -1.85 RIP-Chip
PUB1P32588 LOS1YKL205W 3303 nt3.5□□□□□ -1.85
PUB1P32588 CHD1YER164W 4407 nt3.5□□□□□ -1.85
PUB1P32588 ALG8YOR067C 1734 nt3.5□□□□□ -1.85 RIP-Chip
PUB1P32588 TPS2YDR074W 2691 nt3.5□□□□□ -1.85
PUB1P32588 EBS1YDR206W 2655 nt3.5□□□□□ -1.85
PUB1P32588 YHL041WYHL041W 450 nt3.5□□□□□ -1.85
PUB1P32588 RPS27BYHR021C 249 nt3.5□□□□□ -1.85
PUB1P32588 YML116W-AYML116W-A 303 nt3.5□□□□□ -1.85
PUB1P32588 YOR015WYOR015W 360 nt3.5□□□□□ -1.85 RIP-Chip
PUB1P32588 ALY1YKR021W 2748 nt3.5□□□□□ -1.85
PUB1P32588 FAT1YBR041W 2010 nt3.49□□□□□ -1.85
PUB1P32588 CCT7YJL111W 1653 nt3.49□□□□□ -1.85
PUB1P32588 OAF1YAL051W 3144 nt3.49□□□□□ -1.85 RIP-Chip
PUB1P32588 YLR120W-AYLR120W-A 102 nt3.49□□□□□ -1.85
PUB1P32588 YNL097C-BYNL097C-B 123 nt3.49□□□□□ -1.85
PUB1P32588 snR46snR46 197 nt3.49□□□□□ -1.85
PUB1P32588 ECM16YMR128W 3804 nt3.49□□□□□ -1.85
PUB1P32588 KIN4YOR233W 2403 nt3.49□□□□□ -1.85
PUB1P32588 PSF1YDR013W 627 nt3.48□□□□□ -1.85
PUB1P32588 TIM13YGR181W 318 nt3.48□□□□□ -1.85 RIP-Chip
PUB1P32588 ECM34YHL043W 513 nt3.48□□□□□ -1.85
PUB1P32588 PAU13YHL046C 363 nt3.48□□□□□ -1.85
PUB1P32588 MNL1YHR204W 2391 nt3.48□□□□□ -1.85
PUB1P32588 SPT6YGR116W 4356 nt3.48□□□□□ -1.85
PUB1P32588 MNT3YIL014W 1893 nt3.47□□□□□ -1.85
PUB1P32588 SSE1YPL106C 2082 nt3.47□□□□□ -1.85
PUB1P32588 RPS18AYDR450W 441 nt3.47□□□□□ -1.85
PUB1P32588 RRT15YLR162W-A 189 nt3.47□□□□□ -1.85
PUB1P32588 YPR063CYPR063C 423 nt3.47□□□□□ -1.85
PUB1P32588 RDH54YBR073W 2877 nt3.47□□□□□ -1.85
PUB1P32588 YSH1YLR277C 2340 nt3.47□□□□□ -1.85
PUB1P32588 NRP1YDL167C 2160 nt3.46□□□□□ -1.85 RIP-Chip
PUB1P32588 ROK1YGL171W 1695 nt3.46□□□□□ -1.85
PUB1P32588 PEX8YGR077C 1770 nt3.46□□□□□ -1.86 RIP-Chip
PUB1P32588 ISW2YOR304W 3363 nt3.46□□□□□ -1.86
PUB1P32588 YNL028WYNL028W 318 nt3.46□□□□□ -1.86
PUB1P32588 VPS64YDR200C 1815 nt3.46□□□□□ -1.86
PUB1P32588 ZDS1YMR273C 2748 nt3.45□□□□□ -1.86
PUB1P32588 PRP42YDR235W 1635 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 108.4 ms