Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 IGO1YNL157W 507 nt1.99□□□□□ -2.09
BER1Q06688 SWM2YNR004W 441 nt1.99□□□□□ -2.09
BER1Q06688 YOL150CYOL150C 312 nt1.99□□□□□ -2.09
BER1Q06688 YOR169CYOR169C 465 nt1.99□□□□□ -2.09
BER1Q06688 ADF1YCL058W-A 342 nt1.99□□□□□ -2.09
BER1Q06688 GDI1YER136W 1356 nt1.98□□□□□ -2.09
BER1Q06688 YNL034WYNL034W 1839 nt1.98□□□□□ -2.09
BER1Q06688 SAP185YJL098W 3177 nt1.98□□□□□ -2.09
BER1Q06688 YDR261W-AYDR261W-A 1317 nt1.98□□□□□ -2.09
BER1Q06688 RRP12YPL012W 3687 nt1.98□□□□□ -2.09
BER1Q06688 CLN3YAL040C 1743 nt1.98□□□□□ -2.09
BER1Q06688 YHR032W-AYHR032W-A 180 nt1.98□□□□□ -2.09
BER1Q06688 LIN1YHR156C 1023 nt1.98□□□□□ -2.09
BER1Q06688 PEX18YHR160C 852 nt1.98□□□□□ -2.09
BER1Q06688 YJL086CYJL086C 369 nt1.98□□□□□ -2.09
BER1Q06688 YJL133C-AYJL133C-A 225 nt1.98□□□□□ -2.09
BER1Q06688 YMR144WYMR144W 1029 nt1.98□□□□□ -2.09
BER1Q06688 VTI1YMR197C 654 nt1.98□□□□□ -2.09
BER1Q06688 NSL1YPL233W 651 nt1.98□□□□□ -2.09
BER1Q06688 15S_rRNA15S_rRNA 1649 nt1.98□□□□□ -2.09
BER1Q06688 YRR1YOR162C 2433 nt1.98□□□□□ -2.09
BER1Q06688 MSB1YOR188W 3414 nt1.98□□□□□ -2.09
BER1Q06688 KAR9YPL269W 1935 nt1.97□□□□□ -2.09
BER1Q06688 YGL165CYGL165C 579 nt1.97□□□□□ -2.09
BER1Q06688 YGL218WYGL218W 651 nt1.97□□□□□ -2.09
BER1Q06688 YIR020C-BYIR020C-B 735 nt1.97□□□□□ -2.09
BER1Q06688 YPT6YLR262C 648 nt1.97□□□□□ -2.09
BER1Q06688 SME1YOR159C 285 nt1.97□□□□□ -2.09
BER1Q06688 MSL5YLR116W 1431 nt1.97□□□□□ -2.09
BER1Q06688 RRP6YOR001W 2202 nt1.97□□□□□ -2.09
BER1Q06688 YHR214C-BYHR214C-B 5382 nt1.96□□□□□ -2.1
BER1Q06688 RPL27BYDR471W 411 nt1.96□□□□□ -2.1
BER1Q06688 YLR379WYLR379W 375 nt1.96□□□□□ -2.1
BER1Q06688 ECM25YJL201W 1800 nt1.96□□□□□ -2.1
BER1Q06688 NCS2YNL119W 1482 nt1.95□□□□□ -2.1
BER1Q06688 UBP15YMR304W 3693 nt1.95□□□□□ -2.1
BER1Q06688 VAC8YEL013W 1737 nt1.95□□□□□ -2.1
BER1Q06688 DAD1YDR016C 285 nt1.95□□□□□ -2.1
BER1Q06688 SHE2YKL130C 741 nt1.95□□□□□ -2.1
BER1Q06688 YLR366WYLR366W 306 nt1.95□□□□□ -2.1
BER1Q06688 YNL226WYNL226W 411 nt1.95□□□□□ -2.1
BER1Q06688 IPP1YBR011C 864 nt1.95□□□□□ -2.1
BER1Q06688 ELG1YOR144C 2376 nt1.95□□□□□ -2.1
BER1Q06688 SSE1YPL106C 2082 nt1.95□□□□□ -2.1
BER1Q06688 SSF2YDR312W 1362 nt1.95□□□□□ -2.1
BER1Q06688 SPP41YDR464W 4308 nt1.95□□□□□ -2.1
BER1Q06688 TFC3YAL001C 3483 nt1.94□□□□□ -2.1
BER1Q06688 ECM5YMR176W 4236 nt1.94□□□□□ -2.1
BER1Q06688 UBR2YLR024C 5619 nt1.94□□□□□ -2.1
BER1Q06688 GPI8YDR331W 1236 nt1.94□□□□□ -2.1
BER1Q06688 GET1YGL020C 708 nt1.94□□□□□ -2.1
BER1Q06688 YLR307C-AYLR307C-A 264 nt1.94□□□□□ -2.1
BER1Q06688 RPS12YOR369C 432 nt1.94□□□□□ -2.1
BER1Q06688 ARL3YPL051W 597 nt1.94□□□□□ -2.1
BER1Q06688 SSF1YHR066W 1362 nt1.94□□□□□ -2.1
BER1Q06688 FKS1YLR342W 5631 nt1.94□□□□□ -2.1
BER1Q06688 GCN2YDR283C 4980 nt1.93□□□□□ -2.1
BER1Q06688 YGR115CYGR115C 780 nt1.93□□□□□ -2.1
BER1Q06688 PRS3YHL011C 963 nt1.93□□□□□ -2.1
BER1Q06688 RIO2YNL207W 1278 nt1.93□□□□□ -2.1
BER1Q06688 ATX2YOR079C 942 nt1.93□□□□□ -2.1
BER1Q06688 RGA1YOR127W 3024 nt1.93□□□□□ -2.1
BER1Q06688 TAE2YPL009C 3117 nt1.93□□□□□ -2.1
BER1Q06688 NOP14YDL148C 2433 nt1.92□□□□□ -2.1
BER1Q06688 URK1YNR012W 1506 nt1.92□□□□□ -2.1
BER1Q06688 PBP4YDL053C 558 nt1.92□□□□□ -2.1
BER1Q06688 snR78snR78 87 nt1.92□□□□□ -2.1
BER1Q06688 YFR056CYFR056C 369 nt1.92□□□□□ -2.1
BER1Q06688 TAD1YGL243W 1203 nt1.92□□□□□ -2.1
BER1Q06688 KOG1YHR186C 4674 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)G1tW(CCA)G1 72 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)G2tW(CCA)G2 72 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)JtW(CCA)J 72 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)KtW(CCA)K 72 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)MtW(CCA)M 72 nt1.92□□□□□ -2.1
BER1Q06688 tW(CCA)PtW(CCA)P 72 nt1.92□□□□□ -2.1
BER1Q06688 BMT5YIL096C 1011 nt1.92□□□□□ -2.1
BER1Q06688 SDL1YIL167W 633 nt1.92□□□□□ -2.1
BER1Q06688 YJL047C-AYJL047C-A 135 nt1.92□□□□□ -2.1
BER1Q06688 YLR224WYLR224W 1110 nt1.92□□□□□ -2.1
BER1Q06688 YNL179CYNL179C 438 nt1.92□□□□□ -2.1
BER1Q06688 POP7YBR167C 423 nt1.92□□□□□ -2.1
BER1Q06688 NUP170YBL079W 4509 nt1.92□□□□□ -2.1
BER1Q06688 IST2YBR086C 2841 nt1.92□□□□□ -2.1
BER1Q06688 RUD3YOR216C 1455 nt1.91□□□□□ -2.1
BER1Q06688 YDR248CYDR248C 582 nt1.91□□□□□ -2.1
BER1Q06688 NCB2YDR397C 441 nt1.91□□□□□ -2.1
BER1Q06688 YIP1YGR172C 747 nt1.91□□□□□ -2.1
BER1Q06688 YGR226CYGR226C 210 nt1.91□□□□□ -2.1
BER1Q06688 YPL034WYPL034W 498 nt1.91□□□□□ -2.1
BER1Q06688 YBR287WYBR287W 1284 nt1.91□□□□□ -2.1
BER1Q06688 LEU3YLR451W 2661 nt1.91□□□□□ -2.1
BER1Q06688 MET18YIL128W 3099 nt1.9□□□□□ -2.1
BER1Q06688 TMN3YER113C 2121 nt1.9□□□□□ -2.1
BER1Q06688 YDR115WYDR115W 318 nt1.9□□□□□ -2.11
BER1Q06688 YGL109WYGL109W 324 nt1.9□□□□□ -2.11
BER1Q06688 RRF1YHR038W 693 nt1.9□□□□□ -2.11
BER1Q06688 DGR1YNL130C-A 147 nt1.9□□□□□ -2.11
BER1Q06688 GIM3YNL153C 390 nt1.9□□□□□ -2.11
BER1Q06688 YPL276WYPL276W 438 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms