Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00271P0C7V0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC00271P0C7V0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 AL355075.4-201ENST00000554988 638 ntBASIC21.95■■□□□ 1.1
LINC00271P0C7V0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00271P0C7V0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 RCN1P1-201ENST00000400413 996 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 KRASP1-201ENST00000407852 552 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 RARRES2P10-201ENST00000564312 460 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 MIR4785-201ENST00000585005 73 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 AC133561.5-201ENST00000635547 218 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 AL135905.2-201ENST00000584934 1404 ntBASIC21.94■■□□□ 1.1
LINC00271P0C7V0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00271P0C7V0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.93■■□□□ 1.1
LINC00271P0C7V0 AP001412.1-201ENST00000608405 714 ntBASIC21.93■■□□□ 1.1
LINC00271P0C7V0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00271P0C7V0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00271P0C7V0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms