RNA–Protein interactions for RNA: ENST00000409633.5

UBE2F-203, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-203ENST00000409633 NISCHQ9Y2I1 1504 aa48.08■■■■■ 5.29
UBE2F-203ENST00000409633 CCDC180Q9P1Z9 1646 aa42.69■■■■■ 4.42
UBE2F-203ENST00000409633 ABCC9O60706 1549 aa42.25■■■■■ 4.35
UBE2F-203ENST00000409633 DCAF8L2P0C7V8 631 aa40.49■■■■■ 4.07
UBE2F-203ENST00000409633 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
UBE2F-203ENST00000409633 NACADO15069 1562 aa40.23■■■■■ 4.03
UBE2F-203ENST00000409633 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
UBE2F-203ENST00000409633 MYO15BQ96JP2 1530 aa39.83■■■■□ 3.97
UBE2F-203ENST00000409633 DCAF1Q9Y4B6 1507 aa39.63■■■■□ 3.93
UBE2F-203ENST00000409633 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
UBE2F-203ENST00000409633 UNC13AQ9UPW8 1703 aa39.48■■■■□ 3.91
UBE2F-203ENST00000409633 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
UBE2F-203ENST00000409633 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
UBE2F-203ENST00000409633 DNAJC5BQ9UF47 199 aa39.07■■■■□ 3.85
UBE2F-203ENST00000409633 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
UBE2F-203ENST00000409633 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
UBE2F-203ENST00000409633 CC2D2AQ9P2K1 1620 aa38.12■■■■□ 3.69
UBE2F-203ENST00000409633 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
UBE2F-203ENST00000409633 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
UBE2F-203ENST00000409633 BAZ1AQ9NRL2 1556 aaPredicted RBP37.23■■■■□ 3.55
UBE2F-203ENST00000409633 ATAD2BQ9ULI0 1458 aa37.23■■■■□ 3.55
UBE2F-203ENST00000409633 NCAPD3P42695 1498 aa37.18■■■■□ 3.54
UBE2F-203ENST00000409633 MROH2BQ7Z745 1585 aa37.15■■■■□ 3.54
UBE2F-203ENST00000409633 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
UBE2F-203ENST00000409633 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
UBE2F-203ENST00000409633 BAZ1BQ9UIG0 1483 aaKnown RBP36.9■■■■□ 3.5
UBE2F-203ENST00000409633 PEG3Q9GZU2 1588 aa36.89■■■■□ 3.5
UBE2F-203ENST00000409633 WIZO95785 1651 aa36.73■■■■□ 3.47
UBE2F-203ENST00000409633 RSF1Q96T23 1441 aaPredicted RBP36.62■■■■□ 3.45
UBE2F-203ENST00000409633 NESP48681 1621 aa36.53■■■■□ 3.44
UBE2F-203ENST00000409633 ERCC6Q03468 1493 aa36.37■■■■□ 3.41
UBE2F-203ENST00000409633 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
UBE2F-203ENST00000409633 LAMC3Q9Y6N6 1575 aa36.19■■■■□ 3.38
UBE2F-203ENST00000409633 CADPSQ9ULU8 1353 aa36.13■■■■□ 3.37
UBE2F-203ENST00000409633 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
UBE2F-203ENST00000409633 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
UBE2F-203ENST00000409633 CUX2O14529 1486 aa35.94■■■■□ 3.34
UBE2F-203ENST00000409633 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
UBE2F-203ENST00000409633 THOC2Q8NI27 1593 aaKnown RBP35.89■■■■□ 3.34
UBE2F-203ENST00000409633 CFTRP13569 1480 aa35.85■■■■□ 3.33
UBE2F-203ENST00000409633 FANCD2Q9BXW9 1451 aa35.74■■■■□ 3.31
UBE2F-203ENST00000409633 SUPT5HO00267 1087 aaKnown RBP35.7■■■■□ 3.31
UBE2F-203ENST00000409633 MRC2Q9UBG0 1479 aa35.68■■■■□ 3.3
UBE2F-203ENST00000409633 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
UBE2F-203ENST00000409633 WDR62O43379 1518 aa35.54■■■■□ 3.28
UBE2F-203ENST00000409633 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
UBE2F-203ENST00000409633 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
UBE2F-203ENST00000409633 DNAJC5Q9H3Z4 198 aa35.2■■■■□ 3.23
UBE2F-203ENST00000409633 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
UBE2F-203ENST00000409633 DNMBPQ6XZF7 1577 aa35.03■■■■□ 3.2
UBE2F-203ENST00000409633 ABCC8Q09428 1581 aa34.97■■■■□ 3.19
UBE2F-203ENST00000409633 ZNF608Q9ULD9 1512 aaPredicted RBP34.92■■■■□ 3.18
UBE2F-203ENST00000409633 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
UBE2F-203ENST00000409633 CUX1P39880 1505 aa34.84■■■■□ 3.17
UBE2F-203ENST00000409633 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
UBE2F-203ENST00000409633 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
UBE2F-203ENST00000409633 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
UBE2F-203ENST00000409633 TARBP1Q13395 1621 aaKnown RBP34.74■■■■□ 3.15
UBE2F-203ENST00000409633 SOGA1O94964 1423 aa34.7■■■■□ 3.15
UBE2F-203ENST00000409633 AQRO60306 1485 aaKnown RBP eCLIP34.7■■■■□ 3.153e-6■■■□□ 18.3
UBE2F-203ENST00000409633 EIF4G3O43432 1585 aaKnown RBP34.67■■■■□ 3.14
UBE2F-203ENST00000409633 TDRD9Q8NDG6 1382 aaKnown RBP34.62■■■■□ 3.13
UBE2F-203ENST00000409633 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.12
UBE2F-203ENST00000409633 OSCARQ8IYS5 282 aa34.51■■■■□ 3.12
UBE2F-203ENST00000409633 SYNJ1O43426 1573 aa34.47■■■■□ 3.11
UBE2F-203ENST00000409633 TOP2BQ02880 1626 aa34.39■■■■□ 3.1
UBE2F-203ENST00000409633 WDR97A6NE52 1622 aa34.38■■■■□ 3.09
UBE2F-203ENST00000409633 BIVM-ERCC5R4GMW8 1640 aa34.37■■■■□ 3.09
UBE2F-203ENST00000409633 FBLN2P98095 1184 aa34.37■■■■□ 3.09
UBE2F-203ENST00000409633 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
UBE2F-203ENST00000409633 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
UBE2F-203ENST00000409633 CHD1O14646 1710 aa34.28■■■■□ 3.08
UBE2F-203ENST00000409633 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
UBE2F-203ENST00000409633 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
UBE2F-203ENST00000409633 ABCA5Q8WWZ7 1642 aa34.21■■■■□ 3.07
UBE2F-203ENST00000409633 PBRM1Q86U86 1689 aa34.18■■■■□ 3.06
UBE2F-203ENST00000409633 MAGI1Q96QZ7 1491 aaPredicted RBP34.15■■■■□ 3.06
UBE2F-203ENST00000409633 CHMP7Q8WUX9 453 aaPredicted RBP34.15■■■■□ 3.06
UBE2F-203ENST00000409633 TRIM41Q8WV44 630 aa34.11■■■■□ 3.05
UBE2F-203ENST00000409633 SYNJ2O15056 1496 aa34.07■■■■□ 3.04
UBE2F-203ENST00000409633 RIMBP3CA6NJZ7 1639 aa33.99■■■■□ 3.03
UBE2F-203ENST00000409633 RIMBP3BA6NNM3 1639 aa33.99■■■■□ 3.03
UBE2F-203ENST00000409633 RIMBP3Q9UFD9 1639 aa33.99■■■■□ 3.03
UBE2F-203ENST00000409633 ARHGEF11O15085 1522 aa33.96■■■■□ 3.03
UBE2F-203ENST00000409633 ADAMTS12P58397 1594 aa33.92■■■■□ 3.02
UBE2F-203ENST00000409633 CLASP1Q7Z460 1538 aa33.89■■■■□ 3.02
UBE2F-203ENST00000409633 ERICH3Q5RHP9 1530 aa33.86■■■■□ 3.01
UBE2F-203ENST00000409633 GRIN2AQ12879 1464 aa33.85■■■■□ 3.01
UBE2F-203ENST00000409633 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
UBE2F-203ENST00000409633 KIF27Q86VH2 1401 aa33.77■■■■□ 3
UBE2F-203ENST00000409633 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
UBE2F-203ENST00000409633 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
UBE2F-203ENST00000409633 IGF1RP08069 1367 aa33.72■■■□□ 2.99
UBE2F-203ENST00000409633 ARAP1Q96P48 1450 aa33.71■■■□□ 2.99
UBE2F-203ENST00000409633 NUP160Q12769 1436 aa33.7■■■□□ 2.98
UBE2F-203ENST00000409633 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
UBE2F-203ENST00000409633 ERCC6L2Q5T890 1561 aa33.55■■■□□ 2.96
UBE2F-203ENST00000409633 CARMIL1Q5VZK9 1371 aa33.51■■■□□ 2.96
UBE2F-203ENST00000409633 CUL7Q14999 1698 aa33.49■■■□□ 2.95
UBE2F-203ENST00000409633 SHROOM2Q13796 1616 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms