Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 PLK5-205ENST00000642079 1969 ntBASIC19.87■□□□□ 0.77
KRT78Q8N1N4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT78Q8N1N4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 AC116050.2-201ENST00000612102 1779 ntBASIC19.86■□□□□ 0.77
KRT78Q8N1N4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT78Q8N1N4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT78Q8N1N4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 AC010536.3-201ENST00000620306 533 ntBASIC19.84■□□□□ 0.77
KRT78Q8N1N4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT78Q8N1N4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 AC091799.1-201ENST00000422823 811 ntBASIC19.83■□□□□ 0.77
KRT78Q8N1N4 TERF1P5-201ENST00000477545 1207 ntBASIC19.83■□□□□ 0.77
KRT78Q8N1N4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
KRT78Q8N1N4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT78Q8N1N4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms