Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 RIX1YHR197W 2292 nt3.24□□□□□ -1.89
SSM4P40318 NFT1YKR103W 3657 nt3.23□□□□□ -1.89
SSM4P40318 YDR115WYDR115W 318 nt3.23□□□□□ -1.89
SSM4P40318 EMC4YGL231C 573 nt3.23□□□□□ -1.89
SSM4P40318 YIL012WYIL012W 342 nt3.23□□□□□ -1.89
SSM4P40318 DAD2YKR083C 402 nt3.23□□□□□ -1.89
SSM4P40318 RPS28BYLR264W 204 nt3.23□□□□□ -1.89
SSM4P40318 ATP18YML081C-A 180 nt3.23□□□□□ -1.89
SSM4P40318 DGK1YOR311C 873 nt3.23□□□□□ -1.89
SSM4P40318 TCP1YDR212W 1680 nt3.23□□□□□ -1.89
SSM4P40318 YDR210W-BYDR210W-B 5313 nt3.23□□□□□ -1.89
SSM4P40318 YDR261W-BYDR261W-B 5313 nt3.23□□□□□ -1.89
SSM4P40318 YFL002W-AYFL002W-A 5313 nt3.23□□□□□ -1.89
SSM4P40318 YGR161W-BYGR161W-B 5313 nt3.23□□□□□ -1.89
SSM4P40318 YLR410W-BYLR410W-B 5313 nt3.23□□□□□ -1.89
SSM4P40318 YCL019WYCL019W 5313 nt3.23□□□□□ -1.89
SSM4P40318 BIT61YJL058C 1632 nt3.22□□□□□ -1.89
SSM4P40318 snR59snR59 78 nt3.22□□□□□ -1.89
SSM4P40318 YCR090CYCR090C 549 nt3.22□□□□□ -1.89
SSM4P40318 SEC31YDL195W 3822 nt3.22□□□□□ -1.89
SSM4P40318 YDR018CYDR018C 1191 nt3.22□□□□□ -1.89
SSM4P40318 YDR442WYDR442W 393 nt3.22□□□□□ -1.89
SSM4P40318 SEN54YPL083C 1404 nt3.22□□□□□ -1.89
SSM4P40318 SAP1YER047C 2694 nt3.22□□□□□ -1.89
SSM4P40318 KAP104YBR017C 2757 nt3.22□□□□□ -1.89
SSM4P40318 SHE4YOR035C 2370 nt3.22□□□□□ -1.89
SSM4P40318 ROM1YGR070W 3468 nt3.22□□□□□ -1.89
SSM4P40318 YCK2YNL154C 1641 nt3.22□□□□□ -1.89
SSM4P40318 MAK21YDR060W 3078 nt3.22□□□□□ -1.89
SSM4P40318 DBF20YPR111W 1695 nt3.22□□□□□ -1.89
SSM4P40318 SOK1YDR006C 2706 nt3.21□□□□□ -1.89
SSM4P40318 PDC2YDR081C 2778 nt3.21□□□□□ -1.89
SSM4P40318 YAT2YER024W 2772 nt3.21□□□□□ -1.89
SSM4P40318 YER079C-AYER079C-A 339 nt3.21□□□□□ -1.89
SSM4P40318 CPR7YJR032W 1182 nt3.21□□□□□ -1.89
SSM4P40318 GMC2YLR445W 567 nt3.21□□□□□ -1.89
SSM4P40318 RRT16YNL105W 429 nt3.21□□□□□ -1.89
SSM4P40318 YNL150WYNL150W 408 nt3.21□□□□□ -1.89
SSM4P40318 LOA1YPR139C 903 nt3.21□□□□□ -1.89
SSM4P40318 DSE4YNR067C 3354 nt3.21□□□□□ -1.9
SSM4P40318 MOT1YPL082C 5604 nt3.21□□□□□ -1.9
SSM4P40318 FLO11YIR019C 4104 nt3.21□□□□□ -1.9
SSM4P40318 MLH1YMR167W 2310 nt3.21□□□□□ -1.9
SSM4P40318 NCB2YDR397C 441 nt3.2□□□□□ -1.9
SSM4P40318 ERG28YER044C 447 nt3.2□□□□□ -1.9
SSM4P40318 YGR293CYGR293C 462 nt3.2□□□□□ -1.9
SSM4P40318 LRP1YHR081W 555 nt3.2□□□□□ -1.9
SSM4P40318 BAT1YHR208W 1182 nt3.2□□□□□ -1.9
SSM4P40318 ATP7YKL016C 525 nt3.2□□□□□ -1.9
SSM4P40318 VPS51YKR020W 495 nt3.2□□□□□ -1.9
SSM4P40318 YMR173W-AYMR173W-A 1185 nt3.2□□□□□ -1.9
SSM4P40318 DUF1YOL087C 3351 nt3.2□□□□□ -1.9
SSM4P40318 PDR11YIL013C 4236 nt3.2□□□□□ -1.9
SSM4P40318 ALG14YBR070C 714 nt3.19□□□□□ -1.9
SSM4P40318 YDR210W-AYDR210W-A 1317 nt3.19□□□□□ -1.9
SSM4P40318 KAR9YPL269W 1935 nt3.19□□□□□ -1.9
SSM4P40318 ALK2YBL009W 2031 nt3.19□□□□□ -1.9
SSM4P40318 UTP22YGR090W 3714 nt3.19□□□□□ -1.9
SSM4P40318 BOI1YBL085W 2943 nt3.19□□□□□ -1.9
SSM4P40318 SPB1YCL054W 2526 nt3.19□□□□□ -1.9
SSM4P40318 CDC55YGL190C 1581 nt3.19□□□□□ -1.9
SSM4P40318 GAL80YML051W 1308 nt3.19□□□□□ -1.9
SSM4P40318 YDL187CYDL187C 330 nt3.19□□□□□ -1.9
SSM4P40318 GCN4YEL009C 846 nt3.19□□□□□ -1.9
SSM4P40318 RSR1YGR152C 819 nt3.19□□□□□ -1.9
SSM4P40318 YGR228WYGR228W 345 nt3.19□□□□□ -1.9
SSM4P40318 SDL1YIL167W 633 nt3.19□□□□□ -1.9
SSM4P40318 BUD19YJL188C 309 nt3.19□□□□□ -1.9
SSM4P40318 LCL2YLR104W 396 nt3.19□□□□□ -1.9
SSM4P40318 YLR224WYLR224W 1110 nt3.19□□□□□ -1.9
SSM4P40318 YOL085W-AYOL085W-A 213 nt3.19□□□□□ -1.9
SSM4P40318 MEI5YPL121C 669 nt3.19□□□□□ -1.9
SSM4P40318 snR191snR191 274 nt3.19□□□□□ -1.9
SSM4P40318 RSN1YMR266W 2862 nt3.18□□□□□ -1.9
SSM4P40318 MET5YJR137C 4329 nt3.18□□□□□ -1.9
SSM4P40318 GUP1YGL084C 1683 nt3.18□□□□□ -1.9
SSM4P40318 YDR029WYDR029W 315 nt3.18□□□□□ -1.9
SSM4P40318 SLX9YGR081C 633 nt3.18□□□□□ -1.9
SSM4P40318 AYR1YIL124W 894 nt3.18□□□□□ -1.9
SSM4P40318 STE18YJR086W 333 nt3.18□□□□□ -1.9
SSM4P40318 RLP24YLR009W 600 nt3.18□□□□□ -1.9
SSM4P40318 INP1YMR204C 1263 nt3.18□□□□□ -1.9
SSM4P40318 YOL057WYOL057W 2136 nt3.18□□□□□ -1.9
SSM4P40318 RBL2YOR265W 321 nt3.18□□□□□ -1.9
SSM4P40318 SIP3YNL257C 3690 nt3.17□□□□□ -1.9
SSM4P40318 YRR1YOR162C 2433 nt3.17□□□□□ -1.9
SSM4P40318 INP53YOR109W 3324 nt3.17□□□□□ -1.9
SSM4P40318 RMT2YDR465C 1239 nt3.17□□□□□ -1.9
SSM4P40318 YER165C-AYER165C-A 357 nt3.17□□□□□ -1.9
SSM4P40318 BRP1YGL007W 378 nt3.17□□□□□ -1.9
SSM4P40318 SCEIQ0160 708 nt3.17□□□□□ -1.9
SSM4P40318 YAL037WYAL037W 804 nt3.17□□□□□ -1.9
SSM4P40318 AIM36YMR157C 768 nt3.17□□□□□ -1.9
SSM4P40318 MPP6YNR024W 561 nt3.17□□□□□ -1.9
SSM4P40318 YOR169CYOR169C 465 nt3.17□□□□□ -1.9
SSM4P40318 DNL4YOR005C 2835 nt3.16□□□□□ -1.9
SSM4P40318 MIX14YDR031W 366 nt3.16□□□□□ -1.9
SSM4P40318 IRC2YDR112W 309 nt3.16□□□□□ -1.9
SSM4P40318 YGR242WYGR242W 309 nt3.16□□□□□ -1.9
SSM4P40318 CSE4YKL049C 690 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms