Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL1A2P08123 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A2P08123 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A2P08123 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.75■■□□□ 1.23
COL1A2P08123 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A2P08123 PNMA6B-201ENST00000538162 1200 ntBASIC22.75■■□□□ 1.23
COL1A2P08123 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.75■■□□□ 1.23
COL1A2P08123 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A2P08123 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.74■■□□□ 1.23
COL1A2P08123 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.74■■□□□ 1.23
COL1A2P08123 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A2P08123 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.74■■□□□ 1.23
COL1A2P08123 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
COL1A2P08123 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
COL1A2P08123 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.74■■□□□ 1.23
COL1A2P08123 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A2P08123 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A2P08123 AC008687.6-201ENST00000596318 630 ntBASIC22.74■■□□□ 1.23
COL1A2P08123 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
COL1A2P08123 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
COL1A2P08123 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.73■■□□□ 1.23
COL1A2P08123 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
COL1A2P08123 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 AC006058.3-201ENST00000606217 1069 ntBASIC22.73■■□□□ 1.23
COL1A2P08123 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
COL1A2P08123 Z98882.1-201ENST00000622160 2253 ntBASIC22.73■■□□□ 1.23
COL1A2P08123 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL1A2P08123 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.73■■□□□ 1.23
COL1A2P08123 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A2P08123 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.72■■□□□ 1.23
COL1A2P08123 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.72■■□□□ 1.23
COL1A2P08123 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL1A2P08123 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
COL1A2P08123 AL356652.1-201ENST00000615962 565 ntBASIC22.72■■□□□ 1.23
COL1A2P08123 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL1A2P08123 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL1A2P08123 AC092368.3-202ENST00000574180 1591 ntBASIC22.71■■□□□ 1.23
COL1A2P08123 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.71■■□□□ 1.23
COL1A2P08123 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
COL1A2P08123 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL1A2P08123 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.71■■□□□ 1.23
COL1A2P08123 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.71■■□□□ 1.23
COL1A2P08123 C2orf69P4-201ENST00000565394 541 ntBASIC22.71■■□□□ 1.23
COL1A2P08123 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL1A2P08123 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.71■■□□□ 1.23
COL1A2P08123 AC011484.1-201ENST00000377652 1995 ntBASIC22.71■■□□□ 1.23
COL1A2P08123 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
COL1A2P08123 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COL1A2P08123 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.7■■□□□ 1.22
COL1A2P08123 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.7■■□□□ 1.22
COL1A2P08123 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL1A2P08123 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.7■■□□□ 1.22
COL1A2P08123 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL1A2P08123 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL1A2P08123 AC133561.1-201ENST00000568600 2415 ntBASIC22.7■■□□□ 1.22
COL1A2P08123 AC008403.3-201ENST00000598924 454 ntBASIC22.7■■□□□ 1.22
COL1A2P08123 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.7■■□□□ 1.22
COL1A2P08123 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL1A2P08123 AC066615.1-201ENST00000640911 628 ntBASIC22.7■■□□□ 1.22
COL1A2P08123 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.69■■□□□ 1.22
COL1A2P08123 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL1A2P08123 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.69■■□□□ 1.22
COL1A2P08123 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.69■■□□□ 1.22
COL1A2P08123 AC128676.1-201ENST00000454392 318 ntBASIC22.69■■□□□ 1.22
COL1A2P08123 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
COL1A2P08123 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.69■■□□□ 1.22
COL1A2P08123 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
COL1A2P08123 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
COL1A2P08123 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.68■■□□□ 1.22
COL1A2P08123 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.68■■□□□ 1.22
COL1A2P08123 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 AC098590.1-201ENST00000468126 897 ntBASIC22.68■■□□□ 1.22
COL1A2P08123 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
COL1A2P08123 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms