Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 AC061975.6-201ENST00000579045 1553 ntBASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 AC053503.5-201ENST00000601508 636 ntBASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA13Q9Y5I0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA13Q9Y5I0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
PCDHA13Q9Y5I0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 AC007952.6-201ENST00000573168 2673 ntBASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 AC003957.1-201ENST00000625108 2673 ntBASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 AP004607.4-201ENST00000530158 1459 ntBASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
PCDHA13Q9Y5I0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 AC027682.1-201ENST00000562846 899 ntBASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 AC099778.1-201ENST00000568593 1911 ntBASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA13Q9Y5I0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 MIR572-201ENST00000384983 95 ntBASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHA13Q9Y5I0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA13Q9Y5I0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms