Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 EMI1YDR512C 564 nt3.74□□□□□ -1.81
HDA1P53973 OTU2YHL013C 924 nt3.74□□□□□ -1.81
HDA1P53973 PEP8YJL053W 1140 nt3.74□□□□□ -1.81
HDA1P53973 EMC1YCL045C 2283 nt3.74□□□□□ -1.81
HDA1P53973 CEP3YMR168C 1827 nt3.74□□□□□ -1.81
HDA1P53973 KRE5YOR336W 4098 nt3.74□□□□□ -1.81
HDA1P53973 PKH1YDR490C 2301 nt3.73□□□□□ -1.81
HDA1P53973 SEG1YMR086W 2883 nt3.73□□□□□ -1.81
HDA1P53973 YDR431WYDR431W 312 nt3.73□□□□□ -1.81
HDA1P53973 CDC26YFR036W 375 nt3.73□□□□□ -1.81
HDA1P53973 YGR053CYGR053C 852 nt3.73□□□□□ -1.81
HDA1P53973 OST2YOR103C 393 nt3.73□□□□□ -1.81
HDA1P53973 NOP4YPL043W 2058 nt3.73□□□□□ -1.81
HDA1P53973 CDC40YDR364C 1368 nt3.73□□□□□ -1.81
HDA1P53973 SMB1YER029C 591 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)DtK(UUU)D 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)G1tK(UUU)G1 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)G2tK(UUU)G2 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)KtK(UUU)K 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)LtK(UUU)L 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)OtK(UUU)O 73 nt3.72□□□□□ -1.81
HDA1P53973 tK(UUU)PtK(UUU)P 73 nt3.72□□□□□ -1.81
HDA1P53973 PDX1YGR193C 1233 nt3.72□□□□□ -1.81
HDA1P53973 TCD1YHR003C 1290 nt3.72□□□□□ -1.81
HDA1P53973 LDS2YOL047C 1071 nt3.72□□□□□ -1.81
HDA1P53973 NTC20YBR188C 423 nt3.72□□□□□ -1.81
HDA1P53973 YKL050CYKL050C 2769 nt3.72□□□□□ -1.81
HDA1P53973 MAK5YBR142W 2322 nt3.71□□□□□ -1.82
HDA1P53973 SMI1YGR229C 1518 nt3.71□□□□□ -1.82
HDA1P53973 YDR149CYDR149C 708 nt3.71□□□□□ -1.82
HDA1P53973 VOA1YGR106C 798 nt3.71□□□□□ -1.82
HDA1P53973 YMR141CYMR141C 309 nt3.71□□□□□ -1.82
HDA1P53973 RRT16YNL105W 429 nt3.71□□□□□ -1.82
HDA1P53973 SWM2YNR004W 441 nt3.71□□□□□ -1.82
HDA1P53973 YPL142CYPL142C 318 nt3.71□□□□□ -1.82
HDA1P53973 VID24YBR105C 1089 nt3.71□□□□□ -1.82
HDA1P53973 RPO31YOR116C 4383 nt3.71□□□□□ -1.82
HDA1P53973 SLM2YNL047C 1971 nt3.71□□□□□ -1.82
HDA1P53973 GPI17YDR434W 1605 nt3.7□□□□□ -1.82
HDA1P53973 REC8YPR007C 2043 nt3.7□□□□□ -1.82
HDA1P53973 CWH41YGL027C 2502 nt3.7□□□□□ -1.82
HDA1P53973 YDR442WYDR442W 393 nt3.7□□□□□ -1.82
HDA1P53973 RPL30YGL030W 318 nt3.7□□□□□ -1.82
HDA1P53973 YGR242WYGR242W 309 nt3.7□□□□□ -1.82
HDA1P53973 BCD1YHR040W 1101 nt3.7□□□□□ -1.82
HDA1P53973 PDR17YNL264C 1053 nt3.7□□□□□ -1.82
HDA1P53973 YDR089WYDR089W 2610 nt3.7□□□□□ -1.82
HDA1P53973 YCK2YNL154C 1641 nt3.7□□□□□ -1.82
HDA1P53973 SEN54YPL083C 1404 nt3.7□□□□□ -1.82
HDA1P53973 MPS1YDL028C 2295 nt3.69□□□□□ -1.82
HDA1P53973 CDC33YOL139C 642 nt3.69□□□□□ -1.82
HDA1P53973 YOR277CYOR277C 309 nt3.69□□□□□ -1.82
HDA1P53973 MSL5YLR116W 1431 nt3.69□□□□□ -1.82
HDA1P53973 SEC6YIL068C 2418 nt3.69□□□□□ -1.82
HDA1P53973 YKL222CYKL222C 2118 nt3.68□□□□□ -1.82
HDA1P53973 CHA4YLR098C 1947 nt3.68□□□□□ -1.82
HDA1P53973 SRB4YER022W 2064 nt3.68□□□□□ -1.82
HDA1P53973 DAN4YJR151C 3486 nt3.68□□□□□ -1.82
HDA1P53973 VEL1YGL258W 621 nt3.68□□□□□ -1.82
HDA1P53973 YPS5YGL259W 498 nt3.68□□□□□ -1.82
HDA1P53973 YGR073CYGR073C 372 nt3.68□□□□□ -1.82
HDA1P53973 YJR079WYJR079W 330 nt3.68□□□□□ -1.82
HDA1P53973 OST6YML019W 999 nt3.68□□□□□ -1.82
HDA1P53973 YDL176WYDL176W 2127 nt3.68□□□□□ -1.82
HDA1P53973 HOP1YIL072W 1818 nt3.67□□□□□ -1.82
HDA1P53973 JIP5YPR169W 1479 nt3.67□□□□□ -1.82
HDA1P53973 UTP13YLR222C 2454 nt3.67□□□□□ -1.82
HDA1P53973 STU2YLR045C 2667 nt3.67□□□□□ -1.82
HDA1P53973 YDR194W-AYDR194W-A 153 nt3.67□□□□□ -1.82
HDA1P53973 YGL042CYGL042C 306 nt3.67□□□□□ -1.82
HDA1P53973 COX23YHR116W 456 nt3.67□□□□□ -1.82
HDA1P53973 HHF2YNL030W 312 nt3.67□□□□□ -1.82
HDA1P53973 YPL038W-AYPL038W-A 192 nt3.67□□□□□ -1.82
HDA1P53973 MAL33YBR297W 1407 nt3.67□□□□□ -1.82
HDA1P53973 FRE8YLR047C 2061 nt3.67□□□□□ -1.82
HDA1P53973 YKL156C-AYKL156C-A 117 nt3.66□□□□□ -1.82
HDA1P53973 YAL063C-AYAL063C-A 291 nt3.66□□□□□ -1.82
HDA1P53973 YOL085W-AYOL085W-A 213 nt3.66□□□□□ -1.82
HDA1P53973 PEP12YOR036W 867 nt3.66□□□□□ -1.82
HDA1P53973 RED1YLR263W 2484 nt3.66□□□□□ -1.82
HDA1P53973 SMC3YJL074C 3693 nt3.66□□□□□ -1.82
HDA1P53973 PDS5YMR076C 3834 nt3.66□□□□□ -1.82
HDA1P53973 STP2YHR006W 1626 nt3.66□□□□□ -1.82
HDA1P53973 SRC1YML034W 2505 nt3.66□□□□□ -1.82
HDA1P53973 LCB4YOR171C 1875 nt3.65□□□□□ -1.82
HDA1P53973 SDH7YDR511W 402 nt3.65□□□□□ -1.83
HDA1P53973 YGR035CYGR035C 351 nt3.65□□□□□ -1.83
HDA1P53973 snR42snR42 351 nt3.65□□□□□ -1.83
HDA1P53973 MTR4YJL050W 3222 nt3.65□□□□□ -1.83
HDA1P53973 SSP1YHR184W 1716 nt3.64□□□□□ -1.83
HDA1P53973 IMD4YML056C 1575 nt3.64□□□□□ -1.83
HDA1P53973 CPA2YJR109C 3357 nt3.64□□□□□ -1.83
HDA1P53973 BFR1YOR198C 1413 nt3.64□□□□□ -1.83
HDA1P53973 YCR022CYCR022C 345 nt3.64□□□□□ -1.83
HDA1P53973 tF(GAA)DtF(GAA)D 73 nt3.64□□□□□ -1.83
HDA1P53973 tF(GAA)NtF(GAA)N 73 nt3.64□□□□□ -1.83
HDA1P53973 TWF1YGR080W 999 nt3.64□□□□□ -1.83
HDA1P53973 TEN1YLR010C 483 nt3.64□□□□□ -1.83
HDA1P53973 CGI121YML036W 546 nt3.64□□□□□ -1.83
HDA1P53973 ADI1YMR009W 540 nt3.64□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 172.4 ms