Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 SPE1YKL184W 1401 nt3.39□□□□□ -1.87
RFX1P48743 VFA1YER128W 612 nt3.39□□□□□ -1.87
RFX1P48743 VEL1YGL258W 621 nt3.39□□□□□ -1.87
RFX1P48743 YGR073CYGR073C 372 nt3.39□□□□□ -1.87
RFX1P48743 YAL026C-AYAL026C-A 438 nt3.39□□□□□ -1.87
RFX1P48743 HIT1YJR055W 495 nt3.39□□□□□ -1.87
RFX1P48743 YKL156C-AYKL156C-A 117 nt3.39□□□□□ -1.87
RFX1P48743 PDS5YMR076C 3834 nt3.39□□□□□ -1.87
RFX1P48743 PDR17YNL264C 1053 nt3.39□□□□□ -1.87
RFX1P48743 ICR1ICR1 3199 nt3.39□□□□□ -1.87
RFX1P48743 MAK5YBR142W 2322 nt3.39□□□□□ -1.87
RFX1P48743 YBR012W-AYBR012W-A 1323 nt3.39□□□□□ -1.87
RFX1P48743 YOR142W-AYOR142W-A 1323 nt3.39□□□□□ -1.87
RFX1P48743 YPR158W-AYPR158W-A 1323 nt3.39□□□□□ -1.87
RFX1P48743 YEL1YBL060W 2064 nt3.39□□□□□ -1.87
RFX1P48743 VAC8YEL013W 1737 nt3.39□□□□□ -1.87
RFX1P48743 CDC40YDR364C 1368 nt3.38□□□□□ -1.87
RFX1P48743 FAS1YKL182W 6156 nt3.38□□□□□ -1.87
RFX1P48743 YNR063WYNR063W 1824 nt3.38□□□□□ -1.87
RFX1P48743 AUS1YOR011W 4185 nt3.38□□□□□ -1.87
RFX1P48743 FRQ1YDR373W 573 nt3.38□□□□□ -1.87
RFX1P48743 YDR442WYDR442W 393 nt3.38□□□□□ -1.87
RFX1P48743 SMT3YDR510W 306 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)DtK(UUU)D 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)G1tK(UUU)G1 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)G2tK(UUU)G2 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)KtK(UUU)K 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)LtK(UUU)L 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)OtK(UUU)O 73 nt3.38□□□□□ -1.87
RFX1P48743 tK(UUU)PtK(UUU)P 73 nt3.38□□□□□ -1.87
RFX1P48743 YGR242WYGR242W 309 nt3.38□□□□□ -1.87
RFX1P48743 OTU2YHL013C 924 nt3.38□□□□□ -1.87
RFX1P48743 RPS20YHL015W 366 nt3.38□□□□□ -1.87
RFX1P48743 BET3YKR068C 582 nt3.38□□□□□ -1.87
RFX1P48743 GOT1YMR292W 417 nt3.38□□□□□ -1.87
RFX1P48743 OST2YOR103C 393 nt3.38□□□□□ -1.87
RFX1P48743 VID24YBR105C 1089 nt3.38□□□□□ -1.87
RFX1P48743 FRE8YLR047C 2061 nt3.38□□□□□ -1.87
RFX1P48743 CHA4YLR098C 1947 nt3.38□□□□□ -1.87
RFX1P48743 MAL33YBR297W 1407 nt3.37□□□□□ -1.87
RFX1P48743 CWH41YGL027C 2502 nt3.37□□□□□ -1.87
RFX1P48743 NBL1YHR199C-A 222 nt3.37□□□□□ -1.87
RFX1P48743 RMP1YLR145W 606 nt3.37□□□□□ -1.87
RFX1P48743 YML099W-AYML099W-A 330 nt3.37□□□□□ -1.87
RFX1P48743 YOL134CYOL134C 390 nt3.37□□□□□ -1.87
RFX1P48743 YOR199WYOR199W 330 nt3.37□□□□□ -1.87
RFX1P48743 YBR032WYBR032W 303 nt3.37□□□□□ -1.87
RFX1P48743 YPL185WYPL185W 396 nt3.37□□□□□ -1.87
RFX1P48743 RED1YLR263W 2484 nt3.37□□□□□ -1.87
RFX1P48743 REC8YPR007C 2043 nt3.37□□□□□ -1.87
RFX1P48743 LCB5YLR260W 2064 nt3.37□□□□□ -1.87
RFX1P48743 PEX1YKL197C 3132 nt3.36□□□□□ -1.87
RFX1P48743 PSF1YDR013W 627 nt3.36□□□□□ -1.87
RFX1P48743 YER039C-AYER039C-A 219 nt3.36□□□□□ -1.87
RFX1P48743 RTT102YGR275W 474 nt3.36□□□□□ -1.87
RFX1P48743 YLR269CYLR269C 351 nt3.36□□□□□ -1.87
RFX1P48743 ADI1YMR009W 540 nt3.36□□□□□ -1.87
RFX1P48743 YOL159C-AYOL159C-A 273 nt3.36□□□□□ -1.87
RFX1P48743 HHF1YBR009C 312 nt3.36□□□□□ -1.87
RFX1P48743 YTA7YGR270W 4140 nt3.36□□□□□ -1.87
RFX1P48743 SRB4YER022W 2064 nt3.35□□□□□ -1.87
RFX1P48743 DNM1YLL001W 2274 nt3.35□□□□□ -1.87
RFX1P48743 YDR431WYDR431W 312 nt3.35□□□□□ -1.87
RFX1P48743 TCD1YHR003C 1290 nt3.35□□□□□ -1.87
RFX1P48743 CRG1YHR209W 876 nt3.35□□□□□ -1.87
RFX1P48743 YIL115W-AYIL115W-A 372 nt3.35□□□□□ -1.87
RFX1P48743 RPL15AYLR029C 615 nt3.35□□□□□ -1.87
RFX1P48743 YOL085W-AYOL085W-A 213 nt3.35□□□□□ -1.87
RFX1P48743 SYT1YPR095C 3681 nt3.35□□□□□ -1.87
RFX1P48743 HOP1YIL072W 1818 nt3.35□□□□□ -1.87
RFX1P48743 RRP5YMR229C 5190 nt3.35□□□□□ -1.87
RFX1P48743 CBP2YHL038C 1893 nt3.35□□□□□ -1.87
RFX1P48743 SIZ1YDR409W 2715 nt3.35□□□□□ -1.87
RFX1P48743 YCK2YNL154C 1641 nt3.34□□□□□ -1.87
RFX1P48743 YDR149CYDR149C 708 nt3.34□□□□□ -1.87
RFX1P48743 YEL032C-AYEL032C-A 162 nt3.34□□□□□ -1.87
RFX1P48743 SMB1YER029C 591 nt3.34□□□□□ -1.87
RFX1P48743 YGL042CYGL042C 306 nt3.34□□□□□ -1.87
RFX1P48743 RPL40BYKR094C 387 nt3.34□□□□□ -1.87
RFX1P48743 BSC3YLR465C 309 nt3.34□□□□□ -1.87
RFX1P48743 CSR2YPR030W 3366 nt3.34□□□□□ -1.88
RFX1P48743 VTC4YJL012C 2166 nt3.34□□□□□ -1.88
RFX1P48743 SSP1YHR184W 1716 nt3.33□□□□□ -1.88
RFX1P48743 FLO5YHR211W 3228 nt3.33□□□□□ -1.88
RFX1P48743 PBS2YJL128C 2007 nt3.33□□□□□ -1.88
RFX1P48743 YCR090CYCR090C 549 nt3.33□□□□□ -1.88
RFX1P48743 AIM11YER093C-A 414 nt3.33□□□□□ -1.88
RFX1P48743 LIF1YGL090W 1266 nt3.33□□□□□ -1.88
RFX1P48743 RPN1YHR027C 2982 nt3.33□□□□□ -1.88
RFX1P48743 DLS1YJL065C 504 nt3.33□□□□□ -1.88
RFX1P48743 YAL031W-AYAL031W-A 309 nt3.33□□□□□ -1.88
RFX1P48743 YKL222CYKL222C 2118 nt3.33□□□□□ -1.88
RFX1P48743 YLR416CYLR416C 399 nt3.33□□□□□ -1.88
RFX1P48743 HHF2YNL030W 312 nt3.33□□□□□ -1.88
RFX1P48743 RRT16YNL105W 429 nt3.33□□□□□ -1.88
RFX1P48743 RPS7AYOR096W 573 nt3.33□□□□□ -1.88
RFX1P48743 YAK1YJL141C 2424 nt3.33□□□□□ -1.88
RFX1P48743 XRN1YGL173C 4587 nt3.32□□□□□ -1.88
RFX1P48743 YMR317WYMR317W 3423 nt3.32□□□□□ -1.88
RFX1P48743 PAU10YDR542W 363 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms