Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 PRP39YML046W 1890 nt3.98□□□□□ -1.77
PUB1P32588 YJL132WYJL132W 2253 nt3.98□□□□□ -1.77
PUB1P32588 UTP13YLR222C 2454 nt3.98□□□□□ -1.77
PUB1P32588 YFH1YDL120W 525 nt3.98□□□□□ -1.77 RIP-Chip
PUB1P32588 SPC19YDR201W 498 nt3.98□□□□□ -1.77 RIP-Chip
PUB1P32588 YGL088WYGL088W 366 nt3.98□□□□□ -1.77 RIP-Chip
PUB1P32588 YBL083CYBL083C 426 nt3.98□□□□□ -1.77
PUB1P32588 YPL025CYPL025C 558 nt3.98□□□□□ -1.77 RIP-Chip
PUB1P32588 YRR1YOR162C 2433 nt3.97□□□□□ -1.77
PUB1P32588 KIC1YHR102W 3243 nt3.97□□□□□ -1.77
PUB1P32588 YDL062WYDL062W 426 nt3.97□□□□□ -1.77
PUB1P32588 EPT1YHR123W 1176 nt3.97□□□□□ -1.77 RIP-Chip
PUB1P32588 RPL40AYIL148W 387 nt3.97□□□□□ -1.77
PUB1P32588 TMA10YLR327C 261 nt3.97□□□□□ -1.77
PUB1P32588 SIP18YMR175W 240 nt3.97□□□□□ -1.77
PUB1P32588 HDA2YDR295C 2025 nt3.97□□□□□ -1.77
PUB1P32588 SEG2YKL105C 3399 nt3.97□□□□□ -1.77
PUB1P32588 NPR2YEL062W 1848 nt3.96□□□□□ -1.78
PUB1P32588 MSC7YHR039C 1935 nt3.96□□□□□ -1.78
PUB1P32588 RPG1YBR079C 2895 nt3.96□□□□□ -1.78
PUB1P32588 TIF35YDR429C 825 nt3.96□□□□□ -1.78
PUB1P32588 YFR056CYFR056C 369 nt3.96□□□□□ -1.78
PUB1P32588 ALG13YGL047W 609 nt3.96□□□□□ -1.78
PUB1P32588 YIL032CYIL032C 357 nt3.96□□□□□ -1.78
PUB1P32588 SGN1YIR001C 753 nt3.96□□□□□ -1.78
PUB1P32588 PET191YJR034W 327 nt3.96□□□□□ -1.78
PUB1P32588 COF1YLL050C 432 nt3.96□□□□□ -1.78
PUB1P32588 YAR070CYAR070C 300 nt3.96□□□□□ -1.78
PUB1P32588 HHF2YNL030W 312 nt3.96□□□□□ -1.78 RIP-Chip
PUB1P32588 YPL142CYPL142C 318 nt3.96□□□□□ -1.78
PUB1P32588 TPA1YER049W 1935 nt3.95□□□□□ -1.78
PUB1P32588 SAF1YBR280C 1914 nt3.95□□□□□ -1.78
PUB1P32588 CDC15YAR019C 2925 nt3.95□□□□□ -1.78
PUB1P32588 FRE1YLR214W 2061 nt3.95□□□□□ -1.78 RIP-Chip
PUB1P32588 HPC2YBR215W 1878 nt3.95□□□□□ -1.78
PUB1P32588 GPI14YJR013W 1212 nt3.95□□□□□ -1.78 RIP-Chip
PUB1P32588 YAL059C-AYAL059C-A 423 nt3.95□□□□□ -1.78
PUB1P32588 YBL073WYBL073W 312 nt3.95□□□□□ -1.78
PUB1P32588 UPC2YDR213W 2742 nt3.94□□□□□ -1.78
PUB1P32588 PMC1YGL006W 3522 nt3.94□□□□□ -1.78
PUB1P32588 RLF2YPR018W 1821 nt3.94□□□□□ -1.78
PUB1P32588 YGL042CYGL042C 306 nt3.94□□□□□ -1.78
PUB1P32588 YHR214W-AYHR214W-A 486 nt3.94□□□□□ -1.78
PUB1P32588 YLR230WYLR230W 306 nt3.94□□□□□ -1.78
PUB1P32588 YAR068WYAR068W 486 nt3.94□□□□□ -1.78
PUB1P32588 HIS4YCL030C 2400 nt3.94□□□□□ -1.78
PUB1P32588 URC2YDR520C 2319 nt3.94□□□□□ -1.78
PUB1P32588 ARN1YHL040C 1884 nt3.94□□□□□ -1.78 RIP-Chip
PUB1P32588 GRC3YLL035W 1899 nt3.94□□□□□ -1.78 RIP-Chip
PUB1P32588 MCM4YPR019W 2802 nt3.94□□□□□ -1.78
PUB1P32588 SMP3YOR149C 1551 nt3.93□□□□□ -1.78 RIP-Chip
PUB1P32588 VAC7YNL054W 3498 nt3.93□□□□□ -1.78
PUB1P32588 ASI1YMR119W 1875 nt3.93□□□□□ -1.78
PUB1P32588 CSN9YDR179C 489 nt3.93□□□□□ -1.78
PUB1P32588 YER076W-AYER076W-A 348 nt3.93□□□□□ -1.78
PUB1P32588 YIL165CYIL165C 360 nt3.93□□□□□ -1.78
PUB1P32588 YLR346CYLR346C 306 nt3.93□□□□□ -1.78
PUB1P32588 RPS7BYNL096C 573 nt3.93□□□□□ -1.78
PUB1P32588 YPL238CYPL238C 390 nt3.93□□□□□ -1.78
PUB1P32588 YBR064WYBR064W 429 nt3.93□□□□□ -1.78
PUB1P32588 MVP1YMR004W 1536 nt3.93□□□□□ -1.78
PUB1P32588 UTP25YIL091C 2166 nt3.93□□□□□ -1.78
PUB1P32588 YDL180WYDL180W 1644 nt3.92□□□□□ -1.78
PUB1P32588 BOI2YER114C 3123 nt3.92□□□□□ -1.78
PUB1P32588 YDL199CYDL199C 2064 nt3.92□□□□□ -1.78
PUB1P32588 YDL228CYDL228C 642 nt3.92□□□□□ -1.78
PUB1P32588 YIL141WYIL141W 390 nt3.92□□□□□ -1.78
PUB1P32588 YJR023CYJR023C 402 nt3.92□□□□□ -1.78
PUB1P32588 ISA1YLL027W 753 nt3.92□□□□□ -1.78 RIP-Chip
PUB1P32588 YOR302WYOR302W 78 nt3.92□□□□□ -1.78 RIP-Chip
PUB1P32588 YBR137WYBR137W 540 nt3.92□□□□□ -1.78
PUB1P32588 RAD16YBR114W 2373 nt3.92□□□□□ -1.78
PUB1P32588 SPC72YAL047C 1869 nt3.92□□□□□ -1.78
PUB1P32588 snR68snR68 136 nt3.91□□□□□ -1.78
PUB1P32588 SYO1YDL063C 1863 nt3.91□□□□□ -1.78
PUB1P32588 ESF1YDR365C 1887 nt3.91□□□□□ -1.78
PUB1P32588 HSK3YKL138C-A 210 nt3.91□□□□□ -1.78
PUB1P32588 YAL065CYAL065C 387 nt3.91□□□□□ -1.78
PUB1P32588 CSR1YLR380W 1227 nt3.91□□□□□ -1.78 RIP-Chip
PUB1P32588 YMR141W-AYMR141W-A 225 nt3.91□□□□□ -1.78
PUB1P32588 SFI1YLL003W 2841 nt3.91□□□□□ -1.78
PUB1P32588 YNL193WYNL193W 1677 nt3.9□□□□□ -1.78
PUB1P32588 YOL019WYOL019W 1656 nt3.9□□□□□ -1.78 RIP-Chip
PUB1P32588 UBP10YNL186W 2379 nt3.9□□□□□ -1.78
PUB1P32588 RTC1YOL138C 4026 nt3.9□□□□□ -1.78
PUB1P32588 FAA3YIL009W 2085 nt3.9□□□□□ -1.78
PUB1P32588 NOP19YGR251W 591 nt3.9□□□□□ -1.79
PUB1P32588 PXR1YGR280C 816 nt3.9□□□□□ -1.79
PUB1P32588 RPL34BYIL052C 366 nt3.9□□□□□ -1.79
PUB1P32588 PSY1YKL076C 384 nt3.9□□□□□ -1.79
PUB1P32588 RAD27YKL113C 1149 nt3.9□□□□□ -1.79
PUB1P32588 CWC24YLR323C 780 nt3.9□□□□□ -1.79
PUB1P32588 RPL26AYLR344W 384 nt3.9□□□□□ -1.79 RIP-Chip
PUB1P32588 PIS1YPR113W 663 nt3.9□□□□□ -1.79 RIP-Chip
PUB1P32588 YCK2YNL154C 1641 nt3.9□□□□□ -1.79 RIP-Chip
PUB1P32588 OSW7YFR039C 1533 nt3.9□□□□□ -1.79
PUB1P32588 TYW1YPL207W 2433 nt3.9□□□□□ -1.79
PUB1P32588 RAD61YDR014W 1944 nt3.89□□□□□ -1.79
PUB1P32588 SRC1YML034W 2505 nt3.89□□□□□ -1.79 RIP-Chip
PUB1P32588 YDR048CYDR048C 315 nt3.89□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 74.3 ms