Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 IGHV3-19-201ENST00000521488 291 ntBASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHA13Q9Y5I0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHA13Q9Y5I0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHA13Q9Y5I0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 AC020907.5-201ENST00000624372 1936 ntBASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 AL136116.3-201ENST00000402907 1138 ntBASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHA13Q9Y5I0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHA13Q9Y5I0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA13Q9Y5I0 AC005224.4-201ENST00000583262 1652 ntBASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 AC024257.2-201ENST00000549699 147 ntBASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA13Q9Y5I0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHA13Q9Y5I0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 BX005040.4-201ENST00000637145 1518 ntBASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 PCDHAC2-203ENST00000615316 3011 ntBASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms