Protein–RNA interactions for Protein: P38934

BFR1, Nuclear segregation protein BFR1, yeastyeast

Known RBP RIP-Chip data

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BFR1P38934 SUP54tL(CAA)G2 82 nt2.36□□□□□ -2.03
BFR1P38934 tL(CAA)G3tL(CAA)G3 82 nt2.36□□□□□ -2.03
BFR1P38934 tL(CAA)KtL(CAA)K 82 nt2.36□□□□□ -2.03
BFR1P38934 tL(CAA)LtL(CAA)L 82 nt2.36□□□□□ -2.03
BFR1P38934 tL(CAA)MtL(CAA)M 82 nt2.36□□□□□ -2.03
BFR1P38934 tL(CAA)NtL(CAA)N 82 nt2.36□□□□□ -2.03
BFR1P38934 MST27YGL051W 705 nt2.36□□□□□ -2.03
BFR1P38934 YGR107WYGR107W 450 nt2.36□□□□□ -2.03
BFR1P38934 YGR121W-AYGR121W-A 216 nt2.36□□□□□ -2.03
BFR1P38934 RPL6BYLR448W 531 nt2.36□□□□□ -2.03
BFR1P38934 YBL055CYBL055C 1257 nt2.36□□□□□ -2.03
BFR1P38934 GRX7YBR014C 612 nt2.36□□□□□ -2.03
BFR1P38934 JID1YPR061C 906 nt2.36□□□□□ -2.03
BFR1P38934 YOR296WYOR296W 3870 nt2.36□□□□□ -2.03
BFR1P38934 CDC5YMR001C 2118 nt2.35□□□□□ -2.03
BFR1P38934 YME2YMR302C 2553 nt2.35□□□□□ -2.03
BFR1P38934 SNU23YDL098C 585 nt2.35□□□□□ -2.03
BFR1P38934 YER119C-AYER119C-A 372 nt2.35□□□□□ -2.03
BFR1P38934 NNF1YJR112W 606 nt2.35□□□□□ -2.03
BFR1P38934 MET14YKL001C 609 nt2.35□□□□□ -2.03
BFR1P38934 GAB1YLR459W 1185 nt2.35□□□□□ -2.03 RIP-Chip
BFR1P38934 IGO1YNL157W 507 nt2.35□□□□□ -2.03
BFR1P38934 NGL1YOL042W 1092 nt2.35□□□□□ -2.03
BFR1P38934 UTP15YMR093W 1542 nt2.35□□□□□ -2.03
BFR1P38934 RGA1YOR127W 3024 nt2.35□□□□□ -2.03 RIP-Chip
BFR1P38934 YDR203WYDR203W 318 nt2.34□□□□□ -2.03
BFR1P38934 YDR336WYDR336W 945 nt2.34□□□□□ -2.03
BFR1P38934 RPL24BYGR148C 468 nt2.34□□□□□ -2.03
BFR1P38934 YHR180WYHR180W 492 nt2.34□□□□□ -2.03
BFR1P38934 YKR070WYKR070W 1059 nt2.34□□□□□ -2.03
BFR1P38934 MST28YAR033W 705 nt2.34□□□□□ -2.03
BFR1P38934 JIP3YLR331C 378 nt2.34□□□□□ -2.03
BFR1P38934 YMR099CYMR099C 894 nt2.34□□□□□ -2.03 RIP-Chip
BFR1P38934 PEX15YOL044W 1152 nt2.34□□□□□ -2.03
BFR1P38934 RSA1YPL193W 1146 nt2.34□□□□□ -2.03
BFR1P38934 YPL216WYPL216W 3309 nt2.34□□□□□ -2.03
BFR1P38934 USO1YDL058W 5373 nt2.34□□□□□ -2.04
BFR1P38934 UBX3YDL091C 1368 nt2.34□□□□□ -2.04
BFR1P38934 SEC26YDR238C 2922 nt2.33□□□□□ -2.04 RIP-Chip
BFR1P38934 NPR3YHL023C 3441 nt2.33□□□□□ -2.04
BFR1P38934 RPS17AYML024W 411 nt2.33□□□□□ -2.04
BFR1P38934 ICS2YBR157C 768 nt2.33□□□□□ -2.04
BFR1P38934 STH1YIL126W 4080 nt2.32□□□□□ -2.04 RIP-Chip
BFR1P38934 GCD2YGR083C 1956 nt2.32□□□□□ -2.04 RIP-Chip
BFR1P38934 PUF4YGL014W 2667 nt2.32□□□□□ -2.04 RIP-Chip
BFR1P38934 UBC13YDR092W 462 nt2.32□□□□□ -2.04
BFR1P38934 RPL23BYER117W 414 nt2.32□□□□□ -2.04
BFR1P38934 YFH7YFR007W 1062 nt2.32□□□□□ -2.04
BFR1P38934 IKI1YHR187W 930 nt2.32□□□□□ -2.04
BFR1P38934 YKL069WYKL069W 543 nt2.32□□□□□ -2.04
BFR1P38934 RNP1YLL046C 750 nt2.32□□□□□ -2.04
BFR1P38934 YLL047WYLL047W 384 nt2.32□□□□□ -2.04
BFR1P38934 YLR154W-AYLR154W-A 186 nt2.32□□□□□ -2.04
BFR1P38934 SAM37YMR060C 984 nt2.32□□□□□ -2.04
BFR1P38934 YOL118CYOL118C 309 nt2.32□□□□□ -2.04
BFR1P38934 RGA2YDR379W 3030 nt2.31□□□□□ -2.04 RIP-Chip
BFR1P38934 YDR124WYDR124W 975 nt2.31□□□□□ -2.04
BFR1P38934 SPT15YER148W 723 nt2.31□□□□□ -2.04
BFR1P38934 YGL117WYGL117W 798 nt2.31□□□□□ -2.04
BFR1P38934 YHL044WYHL044W 708 nt2.31□□□□□ -2.04
BFR1P38934 PPE1YHR075C 1203 nt2.31□□□□□ -2.04
BFR1P38934 YHR212CYHR212C 336 nt2.31□□□□□ -2.04
BFR1P38934 NYV1YLR093C 762 nt2.31□□□□□ -2.04
BFR1P38934 YAR060CYAR060C 336 nt2.31□□□□□ -2.04
BFR1P38934 snR35snR35 204 nt2.31□□□□□ -2.04
BFR1P38934 NAB3YPL190C 2409 nt2.31□□□□□ -2.04 RIP-Chip
BFR1P38934 DSE1YER124C 1722 nt2.31□□□□□ -2.04 RIP-Chip
BFR1P38934 SLP1YOR154W 1764 nt2.31□□□□□ -2.04
BFR1P38934 GIN4YDR507C 3429 nt2.3□□□□□ -2.04 RIP-Chip
BFR1P38934 UBR1YGR184C 5853 nt2.3□□□□□ -2.04
BFR1P38934 RSM24YDR175C 960 nt2.3□□□□□ -2.04
BFR1P38934 tF(GAA)DtF(GAA)D 73 nt2.3□□□□□ -2.04
BFR1P38934 tF(GAA)NtF(GAA)N 73 nt2.3□□□□□ -2.04
BFR1P38934 YMR31YFR049W 372 nt2.3□□□□□ -2.04
BFR1P38934 ERP6YGL002W 651 nt2.3□□□□□ -2.04
BFR1P38934 PEX4YGR133W 552 nt2.3□□□□□ -2.04
BFR1P38934 RGM1YMR182C 636 nt2.3□□□□□ -2.04
BFR1P38934 YNL234WYNL234W 1281 nt2.3□□□□□ -2.04
BFR1P38934 snR191snR191 274 nt2.3□□□□□ -2.04
BFR1P38934 FUS1YCL027W 1539 nt2.3□□□□□ -2.04
BFR1P38934 JJJ2YJL162C 1752 nt2.3□□□□□ -2.04
BFR1P38934 YJL181WYJL181W 1836 nt2.3□□□□□ -2.04
BFR1P38934 TPS2YDR074W 2691 nt2.3□□□□□ -2.04
BFR1P38934 ORC1YML065W 2745 nt2.3□□□□□ -2.04
BFR1P38934 CBF2YGR140W 2871 nt2.29□□□□□ -2.04
BFR1P38934 MDM36YPR083W 1740 nt2.29□□□□□ -2.04
BFR1P38934 RGI1YER067W 486 nt2.29□□□□□ -2.04
BFR1P38934 MRM2YGL136C 963 nt2.29□□□□□ -2.04
BFR1P38934 ARC18YLR370C 537 nt2.29□□□□□ -2.04
BFR1P38934 DLT1YMR126C 1029 nt2.29□□□□□ -2.04
BFR1P38934 ATG16YMR159C 453 nt2.29□□□□□ -2.04
BFR1P38934 MIC27YNL100W 705 nt2.29□□□□□ -2.04
BFR1P38934 SME1YOR159C 285 nt2.29□□□□□ -2.04
BFR1P38934 COS111YBR203W 2775 nt2.29□□□□□ -2.04
BFR1P38934 VPS64YDR200C 1815 nt2.28□□□□□ -2.04
BFR1P38934 YIL012WYIL012W 342 nt2.28□□□□□ -2.04
BFR1P38934 YIL046W-AYIL046W-A 165 nt2.28□□□□□ -2.04
BFR1P38934 YLR224WYLR224W 1110 nt2.28□□□□□ -2.04
BFR1P38934 YAP7YOL028C 738 nt2.28□□□□□ -2.04
BFR1P38934 CCL1YPR025C 1182 nt2.28□□□□□ -2.04 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 49.5 ms