Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 MCD1YDL003W 1701 nt0.97□□□□□ -2.25
TRA1P38811 DPP1YDR284C 870 nt0.97□□□□□ -2.25
TRA1P38811 PAM16YJL104W 450 nt0.97□□□□□ -2.25
TRA1P38811 SSU72YNL222W 621 nt0.97□□□□□ -2.25
TRA1P38811 YBR103C-AYBR103C-A 144 nt0.97□□□□□ -2.25
TRA1P38811 RRP42YDL111C 798 nt0.96□□□□□ -2.26
TRA1P38811 YIR014WYIR014W 729 nt0.96□□□□□ -2.26
TRA1P38811 FAB1YFR019W 6837 nt0.96□□□□□ -2.26
TRA1P38811 YDR098C-BYDR098C-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 YDR210C-DYDR210C-D 5268 nt0.96□□□□□ -2.26
TRA1P38811 YER138CYER138C 5268 nt0.96□□□□□ -2.26
TRA1P38811 YGR038C-BYGR038C-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 YLR157C-BYLR157C-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 YML039WYML039W 5268 nt0.96□□□□□ -2.26
TRA1P38811 YNL284C-BYNL284C-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 YOL103W-BYOL103W-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 YPL257W-BYPL257W-B 5268 nt0.96□□□□□ -2.26
TRA1P38811 MRP10YDL045W-A 288 nt0.96□□□□□ -2.26
TRA1P38811 LIP2YLR239C 987 nt0.96□□□□□ -2.26
TRA1P38811 SEN15YMR059W 387 nt0.96□□□□□ -2.26
TRA1P38811 MPD2YOL088C 834 nt0.96□□□□□ -2.26
TRA1P38811 PIS1YPR113W 663 nt0.96□□□□□ -2.26
TRA1P38811 NAN1YPL126W 2691 nt0.96□□□□□ -2.26
TRA1P38811 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
TRA1P38811 TCM62YBR044C 1719 nt0.96□□□□□ -2.26
TRA1P38811 RUD3YOR216C 1455 nt0.96□□□□□ -2.26
TRA1P38811 MSL5YLR116W 1431 nt0.96□□□□□ -2.26
TRA1P38811 RRP14YKL082C 1305 nt0.96□□□□□ -2.26
TRA1P38811 IOC4YMR044W 1428 nt0.95□□□□□ -2.26
TRA1P38811 BUD2YKL092C 3315 nt0.95□□□□□ -2.26
TRA1P38811 SMP3YOR149C 1551 nt0.95□□□□□ -2.26
TRA1P38811 YKL070WYKL070W 510 nt0.95□□□□□ -2.26
TRA1P38811 ATP11YNL315C 957 nt0.95□□□□□ -2.26
TRA1P38811 TMA64YDR117C 1698 nt0.95□□□□□ -2.26
TRA1P38811 YDR365W-BYDR365W-B 5268 nt0.95□□□□□ -2.26
TRA1P38811 YGR027W-BYGR027W-B 5268 nt0.95□□□□□ -2.26
TRA1P38811 YNL054W-BYNL054W-B 5250 nt0.95□□□□□ -2.26
TRA1P38811 YBR012W-BYBR012W-B 5271 nt0.95□□□□□ -2.26
TRA1P38811 TRZ1YKR079C 2517 nt0.95□□□□□ -2.26
TRA1P38811 YLR108CYLR108C 1458 nt0.94□□□□□ -2.26
TRA1P38811 ATP17YDR377W 306 nt0.94□□□□□ -2.26
TRA1P38811 MIG2YGL209W 1149 nt0.94□□□□□ -2.26
TRA1P38811 YGR293CYGR293C 462 nt0.94□□□□□ -2.26
TRA1P38811 RPS0BYLR048W 759 nt0.94□□□□□ -2.26
TRA1P38811 ARC18YLR370C 537 nt0.94□□□□□ -2.26
TRA1P38811 PBY1YBR094W 2262 nt0.94□□□□□ -2.26
TRA1P38811 NPR1YNL183C 2373 nt0.94□□□□□ -2.26
TRA1P38811 SET3YKR029C 2256 nt0.94□□□□□ -2.26
TRA1P38811 CSE4YKL049C 690 nt0.94□□□□□ -2.26
TRA1P38811 YDR261C-DYDR261C-D 4815 nt0.94□□□□□ -2.26
TRA1P38811 MGA2YIR033W 3342 nt0.94□□□□□ -2.26
TRA1P38811 RPF2YKR081C 1035 nt0.93□□□□□ -2.26
TRA1P38811 SMD3YLR147C 306 nt0.93□□□□□ -2.26
TRA1P38811 IDI1YPL117C 867 nt0.93□□□□□ -2.26
TRA1P38811 SPT7YBR081C 3999 nt0.93□□□□□ -2.26
TRA1P38811 DUF1YOL087C 3351 nt0.93□□□□□ -2.26
TRA1P38811 PRP8YHR165C 7242 nt0.93□□□□□ -2.26
TRA1P38811 YBL081WYBL081W 1107 nt0.93□□□□□ -2.26
TRA1P38811 TMA16YOR252W 537 nt0.93□□□□□ -2.26
TRA1P38811 YSY6YBR162W-A 198 nt0.93□□□□□ -2.26
TRA1P38811 ORM2YLR350W 651 nt0.92□□□□□ -2.26
TRA1P38811 MAK5YBR142W 2322 nt0.92□□□□□ -2.26
TRA1P38811 YBL100W-BYBL100W-B 5313 nt0.92□□□□□ -2.26
TRA1P38811 NHP2YDL208W 471 nt0.92□□□□□ -2.26
TRA1P38811 MSN4YKL062W 1893 nt0.92□□□□□ -2.26
TRA1P38811 RKR1YMR247C 4689 nt0.92□□□□□ -2.26
TRA1P38811 TOP2YNL088W 4287 nt0.92□□□□□ -2.26
TRA1P38811 MES1YGR264C 2256 nt0.92□□□□□ -2.26
TRA1P38811 MGT1YDL200C 567 nt0.91□□□□□ -2.26
TRA1P38811 SCL1YGL011C 759 nt0.91□□□□□ -2.26
TRA1P38811 COG2YGR120C 789 nt0.91□□□□□ -2.26
TRA1P38811 YBR139WYBR139W 1527 nt0.91□□□□□ -2.26
TRA1P38811 BAT1YHR208W 1182 nt0.91□□□□□ -2.26
TRA1P38811 SSP2YOR242C 1116 nt0.91□□□□□ -2.26
TRA1P38811 YKU80YMR106C 1890 nt0.91□□□□□ -2.26
TRA1P38811 GPI17YDR434W 1605 nt0.91□□□□□ -2.26
TRA1P38811 SHE2YKL130C 741 nt0.9□□□□□ -2.26
TRA1P38811 snR3snR3 194 nt0.9□□□□□ -2.26
TRA1P38811 USO1YDL058W 5373 nt0.9□□□□□ -2.27
TRA1P38811 TFC8YPL007C 1767 nt0.9□□□□□ -2.27
TRA1P38811 ARG3YJL088W 1017 nt0.9□□□□□ -2.27
TRA1P38811 COQ9YLR201C 783 nt0.9□□□□□ -2.27
TRA1P38811 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
TRA1P38811 AIM6YDL237W 1173 nt0.89□□□□□ -2.27
TRA1P38811 RPN9YDR427W 1182 nt0.89□□□□□ -2.27
TRA1P38811 YGL069CYGL069C 465 nt0.89□□□□□ -2.27
TRA1P38811 SYH1YPL105C 2550 nt0.89□□□□□ -2.27
TRA1P38811 COG4YPR105C 2586 nt0.89□□□□□ -2.27
TRA1P38811 YET1YKL065C 621 nt0.89□□□□□ -2.27
TRA1P38811 SMY2YBR172C 2223 nt0.89□□□□□ -2.27
TRA1P38811 YKR075CYKR075C 924 nt0.89□□□□□ -2.27
TRA1P38811 YPR027CYPR027C 834 nt0.89□□□□□ -2.27
TRA1P38811 YCR087C-AYCR087C-A 462 nt0.88□□□□□ -2.27
TRA1P38811 YER085CYER085C 522 nt0.88□□□□□ -2.27
TRA1P38811 YML009C-AYML009C-A 327 nt0.88□□□□□ -2.27
TRA1P38811 RLF2YPR018W 1821 nt0.88□□□□□ -2.27
TRA1P38811 SPO75YLL005C 2607 nt0.88□□□□□ -2.27
TRA1P38811 IRA1YBR140C 9279 nt0.88□□□□□ -2.27
TRA1P38811 CHS1YNL192W 3396 nt0.87□□□□□ -2.27
TRA1P38811 UBX3YDL091C 1368 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 35.8 ms