RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR3, Length 194 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR3snR3 DRS1P32892 752 aaKnown RBP11.68□□□□□ -0.54
snR3snR3 MTC1P47018 478 aaKnown RBP10.73□□□□□ -0.69
snR3snR3 TFA1P36100 482 aa10.52□□□□□ -0.73
snR3snR3 BFR2Q06631 534 aaKnown RBP10.52□□□□□ -0.73
snR3snR3 RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
snR3snR3 AVT3P36062 692 aa9.74□□□□□ -0.85
snR3snR3 DIP2Q12220 943 aaPredicted RBP9.64□□□□□ -0.87
snR3snR3 TAF7Q05021 590 aa9.24□□□□□ -0.93
snR3snR3 DMA1P38823 416 aa8.99□□□□□ -0.97
snR3snR3 RSE1Q04693 1361 aaKnown RBP8.87□□□□□ -0.99
snR3snR3 LEO1P38439 464 aa8.76□□□□□ -1.01
snR3snR3 PTP3P40048 928 aa8.57□□□□□ -1.04
snR3snR3 ISW2Q08773 1120 aa8.57□□□□□ -1.04
snR3snR3 RPL17AP05740 184 aaKnown RBP8.46□□□□□ -1.06
snR3snR3 RPL17BP46990 184 aaKnown RBP8.46□□□□□ -1.06
snR3snR3 RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
snR3snR3 SSP1P38871 571 aa8.36□□□□□ -1.07
snR3snR3 LEU3P08638 886 aa8.35□□□□□ -1.07
snR3snR3 RIM101P33400 625 aa8.31□□□□□ -1.08
snR3snR3 REB1P21538 810 aa8.3□□□□□ -1.08
snR3snR3 SAS10Q12136 610 aaPredicted RBP8.25□□□□□ -1.09
snR3snR3 SPT21P35209 758 aa8.19□□□□□ -1.1
snR3snR3 ARP8Q12386 881 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
snR3snR3 PRI1P10363 409 aa8.1□□□□□ -1.11
snR3snR3 RPN1P38764 993 aaKnown RBP8.07□□□□□ -1.12
snR3snR3 YAH1Q12184 172 aaKnown RBP8.06□□□□□ -1.12
snR3snR3 OXP1P28273 1286 aa8.05□□□□□ -1.12
snR3snR3 DMA2P53924 522 aa8.02□□□□□ -1.13
snR3snR3 YIL055CP40523 627 aaKnown RBP8.01□□□□□ -1.13
snR3snR3 YLR271WQ06152 274 aa7.99□□□□□ -1.13
snR3snR3 MGA2P40578 1113 aa7.98□□□□□ -1.13
snR3snR3 RLF2Q12495 606 aa7.92□□□□□ -1.14
snR3snR3 AAD16Q02895 342 aa7.86□□□□□ -1.15
snR3snR3 CKB1P43639 278 aa7.85□□□□□ -1.15
snR3snR3 RSM7P47150 247 aa7.85□□□□□ -1.15
snR3snR3 SPB4P25808 606 aaPredicted RBP7.83□□□□□ -1.16
snR3snR3 FAP1P53971 965 aa7.78□□□□□ -1.16
snR3snR3 CST9Q06032 482 aa7.77□□□□□ -1.17
snR3snR3 ABP1P15891 592 aaKnown RBP7.75□□□□□ -1.17
snR3snR3 IFH1P39520 1085 aa7.73□□□□□ -1.17
snR3snR3 YKR023WP36119 530 aaKnown RBP7.72□□□□□ -1.17
snR3snR3 TSR3Q12094 313 aaKnown RBP7.72□□□□□ -1.17
snR3snR3 SET1P38827 1080 aaKnown RBP7.71□□□□□ -1.18
snR3snR3 YPR148CQ06523 435 aa7.71□□□□□ -1.18
snR3snR3 VPS70P47161 811 aa7.7□□□□□ -1.18
snR3snR3 HGH1P48362 394 aaKnown RBP7.7□□□□□ -1.18
snR3snR3 PSD2P53037 1138 aaKnown RBP7.68□□□□□ -1.18
snR3snR3 AI2P03876 854 aa7.63□□□□□ -1.19
snR3snR3 RAM2P29703 316 aa7.63□□□□□ -1.19
snR3snR3 DSF2P38213 736 aa7.62□□□□□ -1.19
snR3snR3 KIN1P13185 1064 aa7.61□□□□□ -1.19
snR3snR3 YNR021WP53723 404 aaKnown RBP7.61□□□□□ -1.19
snR3snR3 TFC8Q12308 588 aa7.59□□□□□ -1.19
snR3snR3 PBS2P08018 668 aa7.57□□□□□ -1.2
snR3snR3 BBC1P47068 1157 aa7.57□□□□□ -1.2
snR3snR3 AIM44Q99299 758 aa7.57□□□□□ -1.2
snR3snR3 HOP09932 586 aa7.56□□□□□ -1.2
snR3snR3 AIM7Q12156 149 aa7.54□□□□□ -1.2
snR3snR3 MRPL32P25348 183 aa7.48□□□□□ -1.21
snR3snR3 MAK11P20484 414 aaKnown RBP7.47□□□□□ -1.21
snR3snR3 GLC3P32775 704 aa7.47□□□□□ -1.21
snR3snR3 MAM3Q12296 706 aa7.47□□□□□ -1.21
snR3snR3 DCD1P06773 312 aa7.44□□□□□ -1.22
snR3snR3 RTG3P38165 486 aa7.44□□□□□ -1.22
snR3snR3 MRM1P25270 412 aa7.43□□□□□ -1.22
snR3snR3 MAK21Q12176 1025 aaKnown RBP7.43□□□□□ -1.22
snR3snR3 RCR1P38212 213 aa7.41□□□□□ -1.22
snR3snR3 GUA1P38625 525 aaKnown RBP7.41□□□□□ -1.22
snR3snR3 IES2P40154 320 aa7.41□□□□□ -1.22
snR3snR3 YML020WQ03722 664 aa7.41□□□□□ -1.22
snR3snR3 HPC2Q01448 625 aa7.4□□□□□ -1.22
snR3snR3 BCH2P36122 765 aa7.39□□□□□ -1.23
snR3snR3 REF2P42073 533 aaPredicted RBP7.39□□□□□ -1.23
snR3snR3 NOP53Q12080 455 aaKnown RBP7.39□□□□□ -1.23
snR3snR3 DIT2P21595 489 aa7.37□□□□□ -1.23
snR3snR3 NUP42P49686 430 aaKnown RBP7.37□□□□□ -1.23
snR3snR3 ATF2P53296 535 aa7.37□□□□□ -1.23
snR3snR3 NOP8Q08287 484 aaPredicted RBP7.37□□□□□ -1.23
snR3snR3 SSA1P10591 642 aaKnown RBP7.36□□□□□ -1.23
snR3snR3 COQ8P27697 501 aa7.35□□□□□ -1.23
snR3snR3 SLX8P40072 274 aa7.35□□□□□ -1.23
snR3snR3 GEF1P37020 779 aa7.34□□□□□ -1.23
snR3snR3 EPS1P40557 701 aa7.34□□□□□ -1.23
snR3snR3 CDC27P38042 758 aa7.32□□□□□ -1.24
snR3snR3 BRL1P38770 471 aa7.31□□□□□ -1.24
snR3snR3 TFB3Q03290 321 aa7.3□□□□□ -1.24
snR3snR3 COX6P00427 148 aa7.29□□□□□ -1.24
snR3snR3 SUB2Q07478 446 aaKnown RBP7.28□□□□□ -1.24
snR3snR3 NAP1P25293 417 aaKnown RBP7.27□□□□□ -1.25
snR3snR3 BDF1P35817 686 aa7.26□□□□□ -1.25
snR3snR3 SSA2P10592 639 aaKnown RBP7.25□□□□□ -1.25
snR3snR3 ORC1P54784 914 aaPredicted RBP7.24□□□□□ -1.25
snR3snR3 MIF2P35201 549 aa7.23□□□□□ -1.25
snR3snR3 VPS29P38759 282 aa7.23□□□□□ -1.25
snR3snR3 NOP7P53261 605 aaKnown RBP7.23□□□□□ -1.25
snR3snR3 SSA4P22202 642 aaKnown RBP7.21□□□□□ -1.26
snR3snR3 SLD2P34252 453 aa7.21□□□□□ -1.26
snR3snR3 PRY3P47033 881 aa7.21□□□□□ -1.26
snR3snR3 PKC1P24583 1151 aa7.18□□□□□ -1.26
snR3snR3 BIM1P40013 344 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms