Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 tF(GAA)FtF(GAA)F 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)GtF(GAA)G 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)H1tF(GAA)H1 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)H2tF(GAA)H2 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 SMP3YOR149C 1551 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-PR3P0C2J1 MRE11YMR224C 2079 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 IST1YNL265C 897 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 CTM1YHR109W 1758 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 AAR2YBL074C 1068 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-PR3P0C2J1 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 NPL4YBR170C 1743 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 MCM21YDR318W 1107 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 FRQ1YDR373W 573 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 MBA1YBR185C 837 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 RLI1YDR091C 1827 nt1.92□□□□□ -2.1
TY1B-PR3P0C2J1 DSE4YNR067C 3354 nt1.91□□□□□ -2.1
TY1B-PR3P0C2J1 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-PR3P0C2J1 CYC2YOR037W 1101 nt1.91□□□□□ -2.1
TY1B-PR3P0C2J1 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-PR3P0C2J1 CNM67YNL225C 1746 nt1.91□□□□□ -2.1
TY1B-PR3P0C2J1 YCK2YNL154C 1641 nt1.9□□□□□ -2.1
TY1B-PR3P0C2J1 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-PR3P0C2J1 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-PR3P0C2J1 YRR1YOR162C 2433 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 NDC80YIL144W 2076 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 COS6YGR295C 1146 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 GRX1YCL035C 333 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 SEC15YGL233W 2733 nt1.9□□□□□ -2.11
TY1B-PR3P0C2J1 OCT1YKL134C 2319 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 SOK1YDR006C 2706 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 ISW2YOR304W 3363 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 YCK3YER123W 1575 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 VPH2YKL119C 648 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 ESF2YNR054C 951 nt1.89□□□□□ -2.11
TY1B-PR3P0C2J1 PLP1YDR183W 693 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 DCG1YIR030C 735 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 YGR237CYGR237C 2358 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 RDS2YPL133C 1341 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 SIP4YJL089W 2490 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
TY1B-PR3P0C2J1 ARP10YDR106W 855 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 UBC6YER100W 753 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 RPS29AYLR388W 171 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 REG1YDR028C 3045 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 PKH3YDR466W 2697 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 STP1YDR463W 1560 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 DBP5YOR046C 1449 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 SPS2YDR522C 1509 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 SPH1YLR313C 1593 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 MIC60YKR016W 1623 nt1.87□□□□□ -2.11
TY1B-PR3P0C2J1 ARG2YJL071W 1725 nt1.86□□□□□ -2.11
TY1B-PR3P0C2J1 ATP25YMR098C 1839 nt1.86□□□□□ -2.11
TY1B-PR3P0C2J1 YCR087C-AYCR087C-A 462 nt1.86□□□□□ -2.11
TY1B-PR3P0C2J1 YOR029WYOR029W 336 nt1.86□□□□□ -2.11
TY1B-PR3P0C2J1 IRC21YMR073C 606 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 AEP2YMR282C 1743 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 YJR003CYJR003C 1560 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 CDC53YDL132W 2448 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 RNA1YMR235C 1224 nt1.85□□□□□ -2.11
TY1B-PR3P0C2J1 TCM62YBR044C 1719 nt1.84□□□□□ -2.11
TY1B-PR3P0C2J1 CIK1YMR198W 1785 nt1.84□□□□□ -2.11
TY1B-PR3P0C2J1 FYV8YGR196C 2454 nt1.84□□□□□ -2.12
TY1B-PR3P0C2J1 SHE2YKL130C 741 nt1.84□□□□□ -2.12
TY1B-PR3P0C2J1 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY1B-PR3P0C2J1 YDR179W-AYDR179W-A 1392 nt1.84□□□□□ -2.12
TY1B-PR3P0C2J1 YER067C-AYER067C-A 324 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 BUR6YER159C 429 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 YBR089WYBR089W 600 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 KCS1YDR017C 3153 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 PRM2YIL037C 1971 nt1.83□□□□□ -2.12
TY1B-PR3P0C2J1 DDI2YFL061W 678 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 CTP1YBR291C 900 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 YFL002W-AYFL002W-A 5313 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 YGR161W-BYGR161W-B 5313 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 YCL019WYCL019W 5313 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 SPP382YLR424W 2127 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 UBR1YGR184C 5853 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 QCR9YGR183C 201 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 YIR017W-AYIR017W-A 600 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 RPL33BYOR234C 324 nt1.82□□□□□ -2.12
TY1B-PR3P0C2J1 YLR035C-AYLR035C-A 3468 nt1.81□□□□□ -2.12
TY1B-PR3P0C2J1 SPO22YIL073C 2928 nt1.81□□□□□ -2.12
TY1B-PR3P0C2J1 ZRG17YNR039C 1818 nt1.81□□□□□ -2.12
TY1B-PR3P0C2J1 RPN9YDR427W 1182 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 66.9 ms