Protein–RNA interactions for Protein: P03372

ESR1, Estrogen receptor, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1P03372 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ESR1P03372 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ESR1P03372 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ESR1P03372 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ESR1P03372 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ESR1P03372 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ESR1P03372 AC019069.1-201ENST00000610008 1333 ntBASIC20.57■□□□□ 0.88
ESR1P03372 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
ESR1P03372 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.57■□□□□ 0.88
ESR1P03372 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.57■□□□□ 0.88
ESR1P03372 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.57■□□□□ 0.88
ESR1P03372 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ESR1P03372 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ESR1P03372 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ESR1P03372 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.56■□□□□ 0.88
ESR1P03372 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.56■□□□□ 0.88
ESR1P03372 AC245052.3-201ENST00000450182 901 ntBASIC20.56■□□□□ 0.88
ESR1P03372 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.56■□□□□ 0.88
ESR1P03372 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.56■□□□□ 0.88
ESR1P03372 SLC7A5P2-201ENST00000553010 536 ntBASIC20.56■□□□□ 0.88
ESR1P03372 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ESR1P03372 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
ESR1P03372 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ESR1P03372 AC121338.2-201ENST00000622535 1744 ntBASIC20.56■□□□□ 0.88
ESR1P03372 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.55■□□□□ 0.88
ESR1P03372 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.55■□□□□ 0.88
ESR1P03372 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.55■□□□□ 0.88
ESR1P03372 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ESR1P03372 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.55■□□□□ 0.88
ESR1P03372 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.55■□□□□ 0.88
ESR1P03372 KRT18P61-201ENST00000585825 1298 ntBASIC20.55■□□□□ 0.88
ESR1P03372 AC087623.3-201ENST00000607047 1098 ntBASIC20.55■□□□□ 0.88
ESR1P03372 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
ESR1P03372 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ESR1P03372 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
ESR1P03372 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.54■□□□□ 0.88
ESR1P03372 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
ESR1P03372 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.54■□□□□ 0.88
ESR1P03372 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 SLC7A5P1-201ENST00000568957 537 ntBASIC20.54■□□□□ 0.88
ESR1P03372 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.54■□□□□ 0.88
ESR1P03372 NTF6G-201ENST00000591094 616 ntBASIC20.54■□□□□ 0.88
ESR1P03372 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 RARRES2P11-201ENST00000635158 484 ntBASIC20.54■□□□□ 0.88
ESR1P03372 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ESR1P03372 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ESR1P03372 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ESR1P03372 PLK5-205ENST00000642079 1969 ntBASIC20.54■□□□□ 0.88
ESR1P03372 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.53■□□□□ 0.88
ESR1P03372 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.53■□□□□ 0.88
ESR1P03372 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.53■□□□□ 0.88
ESR1P03372 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ESR1P03372 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.53■□□□□ 0.88
ESR1P03372 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.53■□□□□ 0.88
ESR1P03372 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 AC006128.1-201ENST00000624704 1661 ntBASIC20.53■□□□□ 0.88
ESR1P03372 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ESR1P03372 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms