Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM56-RWDD3S4R434 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM56-RWDD3S4R434 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 AL391422.3-201ENST00000603791 2761 ntBASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 AFG3L1P-217ENST00000557444 2447 ntBASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TMEM56-RWDD3S4R434 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 AL162377.1-201ENST00000618844 1793 ntBASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM56-RWDD3S4R434 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 AC009299.2-201ENST00000482477 511 ntBASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM56-RWDD3S4R434 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM56-RWDD3S4R434 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM56-RWDD3S4R434 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM56-RWDD3S4R434 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TMEM56-RWDD3S4R434 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TMEM56-RWDD3S4R434 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms