Protein–RNA interactions for Protein: P10828

THRB, Thyroid hormone receptor beta, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRBP10828 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
THRBP10828 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRBP10828 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRBP10828 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRBP10828 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRBP10828 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
THRBP10828 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
THRBP10828 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
THRBP10828 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
THRBP10828 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.55■□□□□ 0.72
THRBP10828 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.55■□□□□ 0.72
THRBP10828 AL391422.3-201ENST00000603791 2761 ntBASIC19.55■□□□□ 0.72
THRBP10828 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
THRBP10828 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
THRBP10828 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRBP10828 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
THRBP10828 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.54■□□□□ 0.72
THRBP10828 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
THRBP10828 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.54■□□□□ 0.72
THRBP10828 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.54■□□□□ 0.72
THRBP10828 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 MIR4466-201ENST00000606121 54 ntBASIC19.54■□□□□ 0.72
THRBP10828 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 AFG3L1P-217ENST00000557444 2447 ntBASIC19.54■□□□□ 0.72
THRBP10828 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRBP10828 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
THRBP10828 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.54■□□□□ 0.72
THRBP10828 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
THRBP10828 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
THRBP10828 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 AC006128.1-201ENST00000624704 1661 ntBASIC19.53■□□□□ 0.72
THRBP10828 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.53■□□□□ 0.72
THRBP10828 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.53■□□□□ 0.72
THRBP10828 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
THRBP10828 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
THRBP10828 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
THRBP10828 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THRBP10828 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.52■□□□□ 0.72
THRBP10828 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
THRBP10828 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
THRBP10828 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
THRBP10828 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.52■□□□□ 0.72
THRBP10828 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.52■□□□□ 0.72
THRBP10828 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THRBP10828 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
THRBP10828 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.52■□□□□ 0.71
THRBP10828 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THRBP10828 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THRBP10828 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THRBP10828 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
THRBP10828 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
THRBP10828 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
THRBP10828 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THRBP10828 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
THRBP10828 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.51■□□□□ 0.71
THRBP10828 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
THRBP10828 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THRBP10828 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms