Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 PEX21YGR239C 867 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 RPL20AYMR242C 519 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 YKU80YMR106C 1890 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 REG1YDR028C 3045 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 PIS1YPR113W 663 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 VMA9YCL005W-A 222 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 OST1YJL002C 1431 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 PCK1YKR097W 1650 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 ERP3YDL018C 678 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 SSN8YNL025C 972 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 MPD2YOL088C 834 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 SYC1YOR179C 567 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 SPO75YLL005C 2607 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 OCT1YKL134C 2319 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 ARG2YJL071W 1725 nt2.17□□□□□ -2.06
TY1B-PR2P0C2J0 FIG4YNL325C 2640 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 ATP25YMR098C 1839 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 MRE11YMR224C 2079 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 SCL1YGL011C 759 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 YBR089WYBR089W 600 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 MCD1YDL003W 1701 nt2.16□□□□□ -2.06
TY1B-PR2P0C2J0 PKR1YMR123W 369 nt2.15□□□□□ -2.06
TY1B-PR2P0C2J0 YNL035CYNL035C 1170 nt2.15□□□□□ -2.06
TY1B-PR2P0C2J0 IBA57YJR122W 1494 nt2.15□□□□□ -2.06
TY1B-PR2P0C2J0 SEC15YGL233W 2733 nt2.15□□□□□ -2.06
TY1B-PR2P0C2J0 YPR089WYPR089W 2667 nt2.15□□□□□ -2.07
TY1B-PR2P0C2J0 NDC80YIL144W 2076 nt2.15□□□□□ -2.07
TY1B-PR2P0C2J0 ELG1YOR144C 2376 nt2.15□□□□□ -2.07
TY1B-PR2P0C2J0 YGR111WYGR111W 1203 nt2.15□□□□□ -2.07
TY1B-PR2P0C2J0 YHR071C-AYHR071C-A 321 nt2.14□□□□□ -2.07
TY1B-PR2P0C2J0 RNA1YMR235C 1224 nt2.14□□□□□ -2.07
TY1B-PR2P0C2J0 NEL1YHR035W 1893 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 RPS25AYGR027C 327 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 TPM2YIL138C 486 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 DSE4YNR067C 3354 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 APM1YPL259C 1428 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 KXD1YGL079W 657 nt2.13□□□□□ -2.07
TY1B-PR2P0C2J0 ALE1YOR175C 1860 nt2.12□□□□□ -2.07
TY1B-PR2P0C2J0 YNL235CYNL235C 432 nt2.12□□□□□ -2.07
TY1B-PR2P0C2J0 SMP3YOR149C 1551 nt2.12□□□□□ -2.07
TY1B-PR2P0C2J0 CNM67YNL225C 1746 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 MRP10YDL045W-A 288 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 YER067C-AYER067C-A 324 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 YKR047WYKR047W 306 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 RGA2YDR379W 3030 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 EPO1YMR124W 2832 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 NUP157YER105C 4176 nt2.11□□□□□ -2.07
TY1B-PR2P0C2J0 YER121WYER121W 345 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 YKL071WYKL071W 771 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 YLR422WYLR422W 5799 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 PHO5YBR093C 1404 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 CIK1YMR198W 1785 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 USO1YDL058W 5373 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 YCR099CYCR099C 468 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 RNR4YGR180C 1038 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 NRG2YBR066C 663 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 AGE1YDR524C 1449 nt2.1□□□□□ -2.07
TY1B-PR2P0C2J0 VPS3YDR495C 3036 nt2.09□□□□□ -2.07
TY1B-PR2P0C2J0 ARP10YDR106W 855 nt2.09□□□□□ -2.07
TY1B-PR2P0C2J0 CTK2YJL006C 972 nt2.09□□□□□ -2.07
TY1B-PR2P0C2J0 YKL165C-AYKL165C-A 234 nt2.09□□□□□ -2.07
TY1B-PR2P0C2J0 AAR2YBL074C 1068 nt2.09□□□□□ -2.07
TY1B-PR2P0C2J0 SOK1YDR006C 2706 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 HOS4YIL112W 3252 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 COG2YGR120C 789 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 YOR032W-AYOR032W-A 201 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 SPP382YLR424W 2127 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 CTM1YHR109W 1758 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 ISF1YMR081C 1017 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 OSW5YMR148W 447 nt2.08□□□□□ -2.08
TY1B-PR2P0C2J0 SYH1YPL105C 2550 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 DOP1YDR141C 5097 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 ART10YLR392C 1557 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 ALB1YJL122W 528 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 HRI1YLR301W 735 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 YOR289WYOR289W 756 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
TY1B-PR2P0C2J0 PEX5YDR244W 1839 nt2.06□□□□□ -2.08
TY1B-PR2P0C2J0 YPK3YBR028C 1578 nt2.06□□□□□ -2.08
TY1B-PR2P0C2J0 RLI1YDR091C 1827 nt2.06□□□□□ -2.08
TY1B-PR2P0C2J0 SEC3YER008C 4011 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 YBL073WYBL073W 312 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 YGR109W-BYGR109W-B 4644 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 VPS54YDR027C 2670 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 PRP3YDR473C 1410 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 RIC1YLR039C 3171 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 MCM21YDR318W 1107 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 PRP18YGR006W 756 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 SNL1YIL016W 480 nt2.05□□□□□ -2.08
TY1B-PR2P0C2J0 UBX3YDL091C 1368 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 TCM62YBR044C 1719 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 YIL142C-AYIL142C-A 333 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 ERG29YMR134W 714 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 RPB11YOL005C 363 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 CNS1YBR155W 1158 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 YDL199CYDL199C 2064 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 TPO5YKL174C 1857 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 SPH1YLR313C 1593 nt2.04□□□□□ -2.08
TY1B-PR2P0C2J0 RIX1YHR197W 2292 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 63.9 ms