Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS25Q9BRG1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VPS25Q9BRG1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC14.66□□□□□ -0.06
VPS25Q9BRG1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 ANOS2P-203ENST00000472227 1816 ntBASIC14.66□□□□□ -0.06
VPS25Q9BRG1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 AP000974.1-201ENST00000623909 2387 ntBASIC14.66□□□□□ -0.06
VPS25Q9BRG1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS25Q9BRG1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms