RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
CBX6-202ENST00000407418 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
CBX6-202ENST00000407418 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
CBX6-202ENST00000407418 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
CBX6-202ENST00000407418 FAM9AQ8IZU1 332 aaPredicted RBP26.62■■□□□ 1.85
CBX6-202ENST00000407418 APLP2Q06481 763 aa26.26■■□□□ 1.79
CBX6-202ENST00000407418 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
CBX6-202ENST00000407418 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
CBX6-202ENST00000407418 ATP1B4Q9UN42 357 aaPredicted RBP25.49■■□□□ 1.67
CBX6-202ENST00000407418 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
CBX6-202ENST00000407418 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
CBX6-202ENST00000407418 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
CBX6-202ENST00000407418 UBTFP17480 764 aaKnown RBP25.08■■□□□ 1.6
CBX6-202ENST00000407418 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
CBX6-202ENST00000407418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
CBX6-202ENST00000407418 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
CBX6-202ENST00000407418 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
CBX6-202ENST00000407418 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.55
CBX6-202ENST00000407418 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
CBX6-202ENST00000407418 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
CBX6-202ENST00000407418 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
CBX6-202ENST00000407418 ABCC9O60706 1549 aa24.42■■□□□ 1.5
CBX6-202ENST00000407418 MYT1Q01538 1121 aa24.31■■□□□ 1.48
CBX6-202ENST00000407418 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
CBX6-202ENST00000407418 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
CBX6-202ENST00000407418 ITGAEP38570 1179 aa24.16■■□□□ 1.46
CBX6-202ENST00000407418 NEFLP07196 543 aa24.16■■□□□ 1.46
CBX6-202ENST00000407418 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
CBX6-202ENST00000407418 SLC4A1APQ9BWU0 796 aaKnown RBP24.02■■□□□ 1.44
CBX6-202ENST00000407418 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
CBX6-202ENST00000407418 FBLN2P98095 1184 aa23.97■■□□□ 1.43
CBX6-202ENST00000407418 YTHDC1Q96MU7 727 aaKnown RBP23.89■■□□□ 1.41
CBX6-202ENST00000407418 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.39
CBX6-202ENST00000407418 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
CBX6-202ENST00000407418 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
CBX6-202ENST00000407418 DAXXQ9UER7 740 aaPredicted RBP23.62■■□□□ 1.37
CBX6-202ENST00000407418 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
CBX6-202ENST00000407418 BCANQ96GW7 911 aa23.6■■□□□ 1.37
CBX6-202ENST00000407418 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
CBX6-202ENST00000407418 NPM1P06748 294 aaKnown RBP eCLIP23.43■■□□□ 1.34
CBX6-202ENST00000407418 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
CBX6-202ENST00000407418 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
CBX6-202ENST00000407418 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
CBX6-202ENST00000407418 ARID3CA6NKF2 412 aa23.25■■□□□ 1.31
CBX6-202ENST00000407418 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
CBX6-202ENST00000407418 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
CBX6-202ENST00000407418 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
CBX6-202ENST00000407418 NEFMP07197 916 aa23.21■■□□□ 1.31
CBX6-202ENST00000407418 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
CBX6-202ENST00000407418 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
CBX6-202ENST00000407418 STAG3Q9UJ98 1225 aa23.2■■□□□ 1.3
CBX6-202ENST00000407418 P3H3Q8IVL6 736 aa23.19■■□□□ 1.3
CBX6-202ENST00000407418 ZBTB47Q9UFB7 747 aaPredicted RBP23.17■■□□□ 1.3
CBX6-202ENST00000407418 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
CBX6-202ENST00000407418 HRCP23327 699 aa23.12■■□□□ 1.29
CBX6-202ENST00000407418 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
CBX6-202ENST00000407418 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
CBX6-202ENST00000407418 RTL5Q5HYW3 569 aaPredicted RBP22.95■■□□□ 1.27
CBX6-202ENST00000407418 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CBX6-202ENST00000407418 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
CBX6-202ENST00000407418 CANXP27824 592 aaKnown RBP22.9■■□□□ 1.26
CBX6-202ENST00000407418 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
CBX6-202ENST00000407418 ANP32CO43423 234 aa22.86■■□□□ 1.25
CBX6-202ENST00000407418 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
CBX6-202ENST00000407418 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
CBX6-202ENST00000407418 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
CBX6-202ENST00000407418 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
CBX6-202ENST00000407418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.22
CBX6-202ENST00000407418 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
CBX6-202ENST00000407418 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CBX6-202ENST00000407418 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CBX6-202ENST00000407418 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
CBX6-202ENST00000407418 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
CBX6-202ENST00000407418 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
CBX6-202ENST00000407418 C14orf37Q86TY3 774 aa22.53■■□□□ 1.2
CBX6-202ENST00000407418 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
CBX6-202ENST00000407418 A0A0G2JS52 829 aa22.5■■□□□ 1.19
CBX6-202ENST00000407418 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
CBX6-202ENST00000407418 MTUS2Q5JR59 1369 aa22.46■■□□□ 1.19
CBX6-202ENST00000407418 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
CBX6-202ENST00000407418 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
CBX6-202ENST00000407418 NACADO15069 1562 aa22.43■■□□□ 1.18
CBX6-202ENST00000407418 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
CBX6-202ENST00000407418 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
CBX6-202ENST00000407418 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
CBX6-202ENST00000407418 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
CBX6-202ENST00000407418 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
CBX6-202ENST00000407418 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
CBX6-202ENST00000407418 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
CBX6-202ENST00000407418 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
CBX6-202ENST00000407418 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
CBX6-202ENST00000407418 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
CBX6-202ENST00000407418 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
CBX6-202ENST00000407418 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
CBX6-202ENST00000407418 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.09■■□□□ 1.13
CBX6-202ENST00000407418 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
CBX6-202ENST00000407418 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
CBX6-202ENST00000407418 CLIP1P30622 1438 aa22.08■■□□□ 1.12
CBX6-202ENST00000407418 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
CBX6-202ENST00000407418 HSP90AA1P07900 732 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms