RNA–Protein interactions for RNA: ENST00000378614.8

SEPHS1-202, Transcript of selenophosphate synthetase 1, humanhuman

TSL 1 (best) BASIC

Gene SEPHS1, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPHS1-202ENST00000378614 NISCHQ9Y2I1 1504 aa36.19■■■■□ 3.38
SEPHS1-202ENST00000378614 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
SEPHS1-202ENST00000378614 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
SEPHS1-202ENST00000378614 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.49
SEPHS1-202ENST00000378614 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
SEPHS1-202ENST00000378614 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
SEPHS1-202ENST00000378614 DCAF1Q9Y4B6 1507 aa29.77■■■□□ 2.36
SEPHS1-202ENST00000378614 ABCC9O60706 1549 aa29.3■■■□□ 2.28
SEPHS1-202ENST00000378614 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
SEPHS1-202ENST00000378614 HRCP23327 699 aa29.22■■■□□ 2.27
SEPHS1-202ENST00000378614 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
SEPHS1-202ENST00000378614 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
SEPHS1-202ENST00000378614 PCGF6Q9BYE7 350 aa28.82■■■□□ 2.2
SEPHS1-202ENST00000378614 PELP1Q8IZL8 1130 aaKnown RBP28.74■■■□□ 2.19
SEPHS1-202ENST00000378614 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SEPHS1-202ENST00000378614 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
SEPHS1-202ENST00000378614 NACADO15069 1562 aa28.52■■■□□ 2.16
SEPHS1-202ENST00000378614 LOC105371045A0A1W2PR82 267 aa28.34■■■□□ 2.13
SEPHS1-202ENST00000378614 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
SEPHS1-202ENST00000378614 CECR2Q9BXF3 1484 aa28.18■■■□□ 2.1
SEPHS1-202ENST00000378614 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
SEPHS1-202ENST00000378614 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
SEPHS1-202ENST00000378614 TRIM26Q12899 539 aaPredicted RBP28.06■■■□□ 2.08
SEPHS1-202ENST00000378614 WIZO95785 1651 aa27.94■■■□□ 2.06
SEPHS1-202ENST00000378614 MYT1Q01538 1121 aa27.9■■■□□ 2.06
SEPHS1-202ENST00000378614 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
SEPHS1-202ENST00000378614 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
SEPHS1-202ENST00000378614 ZEB1P37275 1124 aaPredicted RBP27.71■■■□□ 2.03
SEPHS1-202ENST00000378614 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
SEPHS1-202ENST00000378614 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
SEPHS1-202ENST00000378614 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
SEPHS1-202ENST00000378614 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
SEPHS1-202ENST00000378614 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
SEPHS1-202ENST00000378614 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
SEPHS1-202ENST00000378614 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
SEPHS1-202ENST00000378614 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
SEPHS1-202ENST00000378614 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
SEPHS1-202ENST00000378614 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
SEPHS1-202ENST00000378614 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
SEPHS1-202ENST00000378614 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
SEPHS1-202ENST00000378614 SOGA1O94964 1423 aa27.02■■□□□ 1.92
SEPHS1-202ENST00000378614 EEA1Q15075 1411 aa27■■□□□ 1.91
SEPHS1-202ENST00000378614 CEP162Q5TB80 1403 aa26.93■■□□□ 1.9
SEPHS1-202ENST00000378614 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
SEPHS1-202ENST00000378614 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
SEPHS1-202ENST00000378614 CSRNP3Q8WYN3 585 aa26.89■■□□□ 1.89
SEPHS1-202ENST00000378614 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
SEPHS1-202ENST00000378614 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
SEPHS1-202ENST00000378614 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
SEPHS1-202ENST00000378614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.86■■□□□ 1.89
SEPHS1-202ENST00000378614 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
SEPHS1-202ENST00000378614 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
SEPHS1-202ENST00000378614 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
SEPHS1-202ENST00000378614 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
SEPHS1-202ENST00000378614 GOLGA3Q08378 1498 aa26.78■■□□□ 1.88
SEPHS1-202ENST00000378614 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
SEPHS1-202ENST00000378614 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
SEPHS1-202ENST00000378614 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
SEPHS1-202ENST00000378614 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.85
SEPHS1-202ENST00000378614 TTBK1Q5TCY1 1321 aaPredicted RBP26.63■■□□□ 1.85
SEPHS1-202ENST00000378614 KIF21BO75037 1637 aa26.61■■□□□ 1.85
SEPHS1-202ENST00000378614 GTF3C3Q9Y5Q9 886 aa26.6■■□□□ 1.85
SEPHS1-202ENST00000378614 CENPBP07199 599 aaPredicted RBP26.6■■□□□ 1.85
SEPHS1-202ENST00000378614 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
SEPHS1-202ENST00000378614 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
SEPHS1-202ENST00000378614 CLIP1P30622 1438 aa26.44■■□□□ 1.82
SEPHS1-202ENST00000378614 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
SEPHS1-202ENST00000378614 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
SEPHS1-202ENST00000378614 BIVM-ERCC5R4GMW8 1640 aa26.37■■□□□ 1.81
SEPHS1-202ENST00000378614 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
SEPHS1-202ENST00000378614 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
SEPHS1-202ENST00000378614 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
SEPHS1-202ENST00000378614 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.79
SEPHS1-202ENST00000378614 APLP2Q06481 763 aa26.2■■□□□ 1.78
SEPHS1-202ENST00000378614 CUX1P39880 1505 aa26.18■■□□□ 1.78
SEPHS1-202ENST00000378614 PRXQ9BXM0 1461 aa26.17■■□□□ 1.78
SEPHS1-202ENST00000378614 RANGAP1P46060 587 aaPredicted RBP26.15■■□□□ 1.78
SEPHS1-202ENST00000378614 CFTRP13569 1480 aa26.15■■□□□ 1.78
SEPHS1-202ENST00000378614 YTHDC1Q96MU7 727 aaKnown RBP26.11■■□□□ 1.77
SEPHS1-202ENST00000378614 HNRNPUL2Q1KMD3 747 aaKnown RBP26.11■■□□□ 1.77
SEPHS1-202ENST00000378614 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
SEPHS1-202ENST00000378614 ARAP1Q96P48 1450 aa26.01■■□□□ 1.76
SEPHS1-202ENST00000378614 MIER1Q8N108 512 aa26■■□□□ 1.75
SEPHS1-202ENST00000378614 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
SEPHS1-202ENST00000378614 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
SEPHS1-202ENST00000378614 CUX2O14529 1486 aa25.82■■□□□ 1.72
SEPHS1-202ENST00000378614 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
SEPHS1-202ENST00000378614 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
SEPHS1-202ENST00000378614 IGF1RP08069 1367 aa25.75■■□□□ 1.71
SEPHS1-202ENST00000378614 FGD5Q6ZNL6 1462 aa25.73■■□□□ 1.71
SEPHS1-202ENST00000378614 RRBP1Q9P2E9 1410 aaKnown RBP25.72■■□□□ 1.71
SEPHS1-202ENST00000378614 BCL11AQ9H165 835 aa25.7■■□□□ 1.7
SEPHS1-202ENST00000378614 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
SEPHS1-202ENST00000378614 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
SEPHS1-202ENST00000378614 DHX57Q6P158 1386 aaKnown RBP25.65■■□□□ 1.7
SEPHS1-202ENST00000378614 CCNB3Q8WWL7 1395 aa25.61■■□□□ 1.69
SEPHS1-202ENST00000378614 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
SEPHS1-202ENST00000378614 MAP3K1Q13233 1512 aa25.54■■□□□ 1.68
SEPHS1-202ENST00000378614 TIAM1Q13009 1591 aa25.54■■□□□ 1.68
SEPHS1-202ENST00000378614 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms