RNA–Protein interactions for RNA: ENST00000361927.8

COLGALT2-201, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COLGALT2, Length 5,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-201ENST00000361927 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
COLGALT2-201ENST00000361927 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
COLGALT2-201ENST00000361927 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
COLGALT2-201ENST00000361927 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
COLGALT2-201ENST00000361927 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.62
COLGALT2-201ENST00000361927 MYT1Q01538 1121 aa25.09■■□□□ 1.61
COLGALT2-201ENST00000361927 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
COLGALT2-201ENST00000361927 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
COLGALT2-201ENST00000361927 CENPBP07199 599 aaPredicted RBP24.85■■□□□ 1.57
COLGALT2-201ENST00000361927 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
COLGALT2-201ENST00000361927 HRCP23327 699 aa24.51■■□□□ 1.51
COLGALT2-201ENST00000361927 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
COLGALT2-201ENST00000361927 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
COLGALT2-201ENST00000361927 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
COLGALT2-201ENST00000361927 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
COLGALT2-201ENST00000361927 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
COLGALT2-201ENST00000361927 APLP2Q06481 763 aa24.16■■□□□ 1.46
COLGALT2-201ENST00000361927 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
COLGALT2-201ENST00000361927 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
COLGALT2-201ENST00000361927 NEFLP07196 543 aa23.87■■□□□ 1.41
COLGALT2-201ENST00000361927 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
COLGALT2-201ENST00000361927 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
COLGALT2-201ENST00000361927 RANGAP1P46060 587 aaPredicted RBP23.47■■□□□ 1.35
COLGALT2-201ENST00000361927 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
COLGALT2-201ENST00000361927 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
COLGALT2-201ENST00000361927 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
COLGALT2-201ENST00000361927 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
COLGALT2-201ENST00000361927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
COLGALT2-201ENST00000361927 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
COLGALT2-201ENST00000361927 RTL5Q5HYW3 569 aaPredicted RBP23.02■■□□□ 1.28
COLGALT2-201ENST00000361927 DAXXQ9UER7 740 aaPredicted RBP23.01■■□□□ 1.27
COLGALT2-201ENST00000361927 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
COLGALT2-201ENST00000361927 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
COLGALT2-201ENST00000361927 BCANQ96GW7 911 aa22.94■■□□□ 1.26
COLGALT2-201ENST00000361927 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
COLGALT2-201ENST00000361927 ITGAEP38570 1179 aa22.8■■□□□ 1.24
COLGALT2-201ENST00000361927 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
COLGALT2-201ENST00000361927 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
COLGALT2-201ENST00000361927 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
COLGALT2-201ENST00000361927 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
COLGALT2-201ENST00000361927 CNGB1Q14028 1251 aaPredicted RBP22.59■■□□□ 1.21
COLGALT2-201ENST00000361927 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
COLGALT2-201ENST00000361927 EIF5BO60841 1220 aaKnown RBP22.34■■□□□ 1.17
COLGALT2-201ENST00000361927 ANP32CO43423 234 aa22.33■■□□□ 1.17
COLGALT2-201ENST00000361927 FKBP8Q14318 412 aa22.3■■□□□ 1.16
COLGALT2-201ENST00000361927 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
COLGALT2-201ENST00000361927 ANP32AP39687 249 aaKnown RBP22.22■■□□□ 1.15
COLGALT2-201ENST00000361927 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
COLGALT2-201ENST00000361927 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
COLGALT2-201ENST00000361927 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
COLGALT2-201ENST00000361927 NPM2Q86SE8 214 aaKnown RBP22.07■■□□□ 1.12
COLGALT2-201ENST00000361927 NBR1Q14596 966 aa22.05■■□□□ 1.12
COLGALT2-201ENST00000361927 MIER1Q8N108 512 aa22.04■■□□□ 1.12
COLGALT2-201ENST00000361927 GLIPR1L2Q4G1C9 344 aa21.95■■□□□ 1.11
COLGALT2-201ENST00000361927 BCL11AQ9H165 835 aa21.95■■□□□ 1.1
COLGALT2-201ENST00000361927 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
COLGALT2-201ENST00000361927 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
COLGALT2-201ENST00000361927 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
COLGALT2-201ENST00000361927 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
COLGALT2-201ENST00000361927 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
COLGALT2-201ENST00000361927 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
COLGALT2-201ENST00000361927 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
COLGALT2-201ENST00000361927 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
COLGALT2-201ENST00000361927 CCDC136Q96JN2 1154 aa21.67■■□□□ 1.06
COLGALT2-201ENST00000361927 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
COLGALT2-201ENST00000361927 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
COLGALT2-201ENST00000361927 SUPT16HQ9Y5B9 1047 aaKnown RBP21.61■■□□□ 1.05
COLGALT2-201ENST00000361927 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
COLGALT2-201ENST00000361927 ANP32BQ92688 251 aaKnown RBP21.55■■□□□ 1.04
COLGALT2-201ENST00000361927 ARXQ96QS3 562 aa21.55■■□□□ 1.04
COLGALT2-201ENST00000361927 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
COLGALT2-201ENST00000361927 RTN4Q9NQC3 1192 aaKnown RBP21.55■■□□□ 1.04
COLGALT2-201ENST00000361927 TONSLQ96HA7 1378 aa21.46■■□□□ 1.03
COLGALT2-201ENST00000361927 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
COLGALT2-201ENST00000361927 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
COLGALT2-201ENST00000361927 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
COLGALT2-201ENST00000361927 DEKP35659 375 aaKnown RBP21.39■■□□□ 1.01
COLGALT2-201ENST00000361927 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
COLGALT2-201ENST00000361927 NEFMP07197 916 aa21.38■■□□□ 1.01
COLGALT2-201ENST00000361927 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
COLGALT2-201ENST00000361927 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
COLGALT2-201ENST00000361927 NOP58Q9Y2X3 529 aaKnown RBP21.34■■□□□ 1.01
COLGALT2-201ENST00000361927 TMC1Q8TDI8 760 aa21.27■■□□□ 1
COLGALT2-201ENST00000361927 TSHZ2Q9NRE2 1034 aa21.27■■□□□ 1
COLGALT2-201ENST00000361927 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
COLGALT2-201ENST00000361927 P3H3Q8IVL6 736 aa21.27■■□□□ 1
COLGALT2-201ENST00000361927 ERICH6BQ5W0A0 696 aa21.26■□□□□ 0.99
COLGALT2-201ENST00000361927 LAS1LQ9Y4W2 734 aaKnown RBP21.26■□□□□ 0.99
COLGALT2-201ENST00000361927 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
COLGALT2-201ENST00000361927 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
COLGALT2-201ENST00000361927 TRIM44Q96DX7 344 aaPredicted RBP21.17■□□□□ 0.98
COLGALT2-201ENST00000361927 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
COLGALT2-201ENST00000361927 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.15■□□□□ 0.98
COLGALT2-201ENST00000361927 B4GALNT3Q6L9W6 998 aa21.11■□□□□ 0.97
COLGALT2-201ENST00000361927 BECN1Q14457 450 aa21.08■□□□□ 0.97
COLGALT2-201ENST00000361927 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.08■□□□□ 0.97
COLGALT2-201ENST00000361927 SENP3-EIF4A1A0A087X0R7 540 aa21.05■□□□□ 0.96
COLGALT2-201ENST00000361927 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
COLGALT2-201ENST00000361927 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
COLGALT2-201ENST00000361927 TNNT2P45379 298 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms