Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 tC(GCA)BtC(GCA)B 72 nt4.04□□□□□ -1.76
UBP12P39538 tC(GCA)GtC(GCA)G 72 nt4.04□□□□□ -1.76
UBP12P39538 tC(GCA)P1tC(GCA)P1 72 nt4.04□□□□□ -1.76
UBP12P39538 tC(GCA)P2tC(GCA)P2 72 nt4.04□□□□□ -1.76
UBP12P39538 YER046W-AYER046W-A 330 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)DtK(UUU)D 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)G1tK(UUU)G1 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)G2tK(UUU)G2 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)KtK(UUU)K 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)LtK(UUU)L 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)OtK(UUU)O 73 nt4.04□□□□□ -1.76
UBP12P39538 tK(UUU)PtK(UUU)P 73 nt4.04□□□□□ -1.76
UBP12P39538 LST7YGR057C 729 nt4.04□□□□□ -1.76
UBP12P39538 YKE2YLR200W 345 nt4.04□□□□□ -1.76
UBP12P39538 SLK19YOR195W 2466 nt4.04□□□□□ -1.76
UBP12P39538 YGL140CYGL140C 3660 nt4.04□□□□□ -1.76
UBP12P39538 PEX5YDR244W 1839 nt4.04□□□□□ -1.76
UBP12P39538 REG1YDR028C 3045 nt4.03□□□□□ -1.76
UBP12P39538 NSA1YGL111W 1392 nt4.03□□□□□ -1.76
UBP12P39538 YDR461C-AYDR461C-A 243 nt4.03□□□□□ -1.76
UBP12P39538 DSE2YHR143W 978 nt4.03□□□□□ -1.76
UBP12P39538 YLL044WYLL044W 447 nt4.03□□□□□ -1.76
UBP12P39538 RPL15AYLR029C 615 nt4.03□□□□□ -1.76
UBP12P39538 YRO2YBR054W 1035 nt4.03□□□□□ -1.76
UBP12P39538 MUB1YMR100W 1863 nt4.03□□□□□ -1.77
UBP12P39538 NUP60YAR002W 1620 nt4.03□□□□□ -1.77
UBP12P39538 FRE8YLR047C 2061 nt4.02□□□□□ -1.77
UBP12P39538 SSE2YBR169C 2082 nt4.02□□□□□ -1.77
UBP12P39538 PBP4YDL053C 558 nt4.02□□□□□ -1.77
UBP12P39538 DAL2YIR029W 1032 nt4.02□□□□□ -1.77
UBP12P39538 YLR257WYLR257W 966 nt4.02□□□□□ -1.77
UBP12P39538 SCD6YPR129W 1050 nt4.02□□□□□ -1.77
UBP12P39538 LOA1YPR139C 903 nt4.02□□□□□ -1.77
UBP12P39538 MBA1YBR185C 837 nt4.02□□□□□ -1.77
UBP12P39538 YDR061WYDR061W 1620 nt4.02□□□□□ -1.77
UBP12P39538 MSH4YFL003C 2637 nt4.02□□□□□ -1.77
UBP12P39538 HEF3YNL014W 3135 nt4.01□□□□□ -1.77
UBP12P39538 YLR446WYLR446W 1302 nt4.01□□□□□ -1.77
UBP12P39538 BCD1YHR040W 1101 nt4.01□□□□□ -1.77
UBP12P39538 YHR050W-AYHR050W-A 171 nt4.01□□□□□ -1.77
UBP12P39538 VMA5YKL080W 1179 nt4.01□□□□□ -1.77
UBP12P39538 RPL16BYNL069C 597 nt4.01□□□□□ -1.77
UBP12P39538 GRE2YOL151W 1029 nt4.01□□□□□ -1.77
UBP12P39538 YPL068CYPL068C 882 nt4.01□□□□□ -1.77
UBP12P39538 YPR108W-AYPR108W-A 213 nt4.01□□□□□ -1.77
UBP12P39538 LST4YKL176C 2487 nt4.01□□□□□ -1.77
UBP12P39538 YCT1YLL055W 1596 nt4.01□□□□□ -1.77
UBP12P39538 VBA4YDR119W 2307 nt4□□□□□ -1.77
UBP12P39538 OCA6YDR067C 675 nt4□□□□□ -1.77
UBP12P39538 YGL214WYGL214W 486 nt4□□□□□ -1.77
UBP12P39538 YOR073W-AYOR073W-A 234 nt4□□□□□ -1.77
UBP12P39538 FAS1YKL182W 6156 nt4□□□□□ -1.77
UBP12P39538 CWH41YGL027C 2502 nt3.99□□□□□ -1.77
UBP12P39538 PDS5YMR076C 3834 nt3.99□□□□□ -1.77
UBP12P39538 MUS81YDR386W 1899 nt3.99□□□□□ -1.77
UBP12P39538 SRD1YCR018C 666 nt3.99□□□□□ -1.77
UBP12P39538 HLR1YDR528W 1272 nt3.99□□□□□ -1.77
UBP12P39538 THO1YER063W 657 nt3.99□□□□□ -1.77
UBP12P39538 YGL039WYGL039W 1047 nt3.99□□□□□ -1.77
UBP12P39538 LIF1YGL090W 1266 nt3.99□□□□□ -1.77
UBP12P39538 SAE2YGL175C 1038 nt3.99□□□□□ -1.77
UBP12P39538 PPX1YHR201C 1194 nt3.99□□□□□ -1.77
UBP12P39538 VPS63YLR261C 327 nt3.99□□□□□ -1.77
UBP12P39538 VPS30YPL120W 1674 nt3.99□□□□□ -1.77
UBP12P39538 MSH2YOL090W 2895 nt3.99□□□□□ -1.77
UBP12P39538 SIZ1YDR409W 2715 nt3.99□□□□□ -1.77
UBP12P39538 RIM13YMR154C 2184 nt3.99□□□□□ -1.77
UBP12P39538 DAN4YJR151C 3486 nt3.98□□□□□ -1.77
UBP12P39538 GYL1YMR192W 2163 nt3.98□□□□□ -1.77
UBP12P39538 MGT1YDL200C 567 nt3.98□□□□□ -1.77
UBP12P39538 NTF2YER009W 378 nt3.98□□□□□ -1.77
UBP12P39538 RTT105YER104W 627 nt3.98□□□□□ -1.77
UBP12P39538 EMC4YGL231C 573 nt3.98□□□□□ -1.77
UBP12P39538 GOT1YMR292W 417 nt3.98□□□□□ -1.77
UBP12P39538 DYN3YMR299C 939 nt3.98□□□□□ -1.77
UBP12P39538 YAP7YOL028C 738 nt3.98□□□□□ -1.77
UBP12P39538 KRI1YNL308C 1776 nt3.98□□□□□ -1.77
UBP12P39538 XRS2YDR369C 2565 nt3.98□□□□□ -1.77
UBP12P39538 RAD5YLR032W 3510 nt3.97□□□□□ -1.77
UBP12P39538 BRE5YNR051C 1548 nt3.97□□□□□ -1.77
UBP12P39538 RAD26YJR035W 3258 nt3.97□□□□□ -1.77
UBP12P39538 CPR5YDR304C 678 nt3.97□□□□□ -1.77
UBP12P39538 TMA20YER007C-A 546 nt3.97□□□□□ -1.77
UBP12P39538 VMA21YGR105W 234 nt3.97□□□□□ -1.77
UBP12P39538 EFG1YGR271C-A 702 nt3.97□□□□□ -1.77
UBP12P39538 SFT1YKL006C-A 294 nt3.97□□□□□ -1.77
UBP12P39538 RPL17AYKL180W 555 nt3.97□□□□□ -1.77
UBP12P39538 ECI1YLR284C 843 nt3.97□□□□□ -1.77
UBP12P39538 SEC66YBR171W 621 nt3.97□□□□□ -1.77
UBP12P39538 UBX3YDL091C 1368 nt3.97□□□□□ -1.77
UBP12P39538 MYO5YMR109W 3660 nt3.96□□□□□ -1.78
UBP12P39538 YDR262WYDR262W 819 nt3.96□□□□□ -1.78
UBP12P39538 YGR109W-AYGR109W-A 873 nt3.96□□□□□ -1.78
UBP12P39538 RPS23AYGR118W 438 nt3.96□□□□□ -1.78
UBP12P39538 PET54YGR222W 882 nt3.96□□□□□ -1.78
UBP12P39538 tV(CAC)DtV(CAC)D 73 nt3.96□□□□□ -1.78
UBP12P39538 tV(CAC)HtV(CAC)H 73 nt3.96□□□□□ -1.78
UBP12P39538 YIL082WYIL082W 873 nt3.96□□□□□ -1.78
UBP12P39538 RPL17BYJL177W 555 nt3.96□□□□□ -1.78
UBP12P39538 YKL023C-AYKL023C-A 228 nt3.96□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 50.2 ms